RNA–Protein interactions for RNA: ENST00000509259.5

CAST-225, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-225	ENST00000509259	SRRM1	Q8IYB3	904 aa	Known RBP	7.99	□□□□□ -1.13
CAST-225	ENST00000509259	TRAM1L1	Q8N609	369 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	MAML1	Q92585	1016 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	PNPLA2	Q96AD5	504 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	SLC41A2	Q96JW4	573 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	ZNF830	Q96NB3	372 aa	Predicted RBP	7.99	□□□□□ -1.13
CAST-225	ENST00000509259	GPR63	Q9BZJ6	419 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	HAUS4	Q9H6D7	363 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	7.99	□□□□□ -1.13
CAST-225	ENST00000509259	FANCE	Q9HB96	536 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	MLXIPL	Q9NP71	852 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	SOHLH2	Q9NX45	425 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	GPR83	Q9NYM4	423 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	EPHA6	Q9UF33	1036 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	ERRFI1	Q9UJM3	462 aa	Predicted RBP	7.99	□□□□□ -1.13
CAST-225	ENST00000509259	MYO6	Q9UM54	1294 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	SHOC2	Q9UQ13	582 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	TNRC6A	Q8NDV7	1962 aa	Known RBP	7.99	□□□□□ -1.13
CAST-225	ENST00000509259	CSMD1	Q96PZ7	3565 aa		7.99	□□□□□ -1.13
CAST-225	ENST00000509259	DOPEY1	Q5JWR5	2465 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ZNF106	Q9H2Y7	1883 aa	Known RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TLCD2	A6NGC4	264 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	LRRC53	A6NM62	1247 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	NOTO	A8MTQ0	251 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	CHUK	O15111	745 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KRT86	O43790	486 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TMEM63A	O94886	807 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	PIRT	P0C851	137 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	BRAF	P15056	766 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	CCNC	P24863	283 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TNFRSF8	P28908	595 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	RRAD	P55042	308 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	DCDC1	P59894	354 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TUBB4B	P68371	445 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	HSD11B2	P80365	405 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	NIPAL4	Q0D2K0	466 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KLHL30	Q0D2K2	578 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	RAPSN	Q13702	412 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TUBB2A	Q13885	445 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	IHH	Q14623	411 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ESPL1	Q14674	2120 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	GPR19	Q15760	415 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	HADH	Q16836	314 aa	Known RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TMTC4	Q5T4D3	741 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ZFYVE27	Q5T4F4	411 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TXNRD3NB	Q6F5E7	133 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	WASH2P	Q6VEQ5	465 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KMT5C	Q86Y97	462 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	IQCK	Q8N0W5	287 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ENDOV	Q8N8Q3	282 aa	Known RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KCTD6	Q8NC69	237 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	GPR26	Q8NDV2	337 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	FDCSP	Q8NFU4	85 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	OR8K5	Q8NH50	307 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ARRDC2	Q8TBH0	407 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	CLIP3	Q96DZ5	547 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	SGSM3	Q96HU1	749 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	CD180	Q99467	661 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	MAP3K3	Q99759	626 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	SYT11	Q9BT88	431 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	TUBB2B	Q9BVA1	445 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	NUP85	Q9BW27	656 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	NUDT9	Q9BW91	350 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	SGPP1	Q9BX95	441 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KRTAP4-7	Q9BYR0	210 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	SLC7A5P2	Q9GIP4	190 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	RAB33B	Q9H082	229 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ILKAP	Q9H0C8	392 aa	Predicted RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	CHST8	Q9H2A9	424 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	KCND1	Q9NSA2	647 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	DTL	Q9NZJ0	730 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	IP6K2	Q9UHH9	426 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ANAPC7	Q9UJX3	599 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	PSMD13	Q9UNM6	376 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	SRPK3	Q9UPE1	567 aa		7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ANKRD17	O75179	2603 aa	Known RBP	7.98	□□□□□ -1.13
CAST-225	ENST00000509259	ANKUB1	A6NFN9	424 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	ZBTB11	O95625	1053 aa	Predicted RBP	7.97	□□□□□ -1.13
CAST-225	ENST00000509259	LDLR	P01130	860 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	JCHAIN	P01591	159 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	ALPP	P05187	535 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	CD48	P09326	243 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	CYP2A7	P20853	494 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	ENDOU	P21128	410 aa	Known RBP	7.97	□□□□□ -1.13
CAST-225	ENST00000509259	ELAVL4	P26378	380 aa	Known RBP	7.97	□□□□□ -1.13
CAST-225	ENST00000509259	VAV2	P52735	878 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	SLC25A11	Q02978	314 aa	Known RBP	7.97	□□□□□ -1.13
CAST-225	ENST00000509259	CDK18	Q07002	472 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	GPS2	Q13227	327 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	XRCC4	Q13426	336 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	DPYSL3	Q14195	570 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	PAFAH1B3	Q15102	231 aa	Known RBP	7.97	□□□□□ -1.13
CAST-225	ENST00000509259	ZRANB3	Q5FWF4	1079 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	CCDC183	Q5T5S1	534 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	LYPLAL1	Q5VWZ2	237 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	IZUMO3	Q5VZ72	239 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	NCBP2-AS2	Q69YL0	99 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	CCDC70	Q6NSX1	233 aa		7.97	□□□□□ -1.13
CAST-225	ENST00000509259	SASS6	Q6UVJ0	657 aa		7.97	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms