RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ARHGEF33A8MVX0 844 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TXNDC9O14530 226 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 OGTO15294 1046 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TGM5O43548 720 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 C4BPAP04003 597 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SFTPCP11686 197 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 LAMP2P13473 410 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SLC6A6P31641 620 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 GUCY1A2P33402 732 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CLCN7P51798 805 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NDUFA8P51970 172 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PRKCQQ04759 706 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BST2Q10589 180 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SEMA3BQ13214 749 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NKG7Q16617 165 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 COL28A1Q2UY09 1125 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 KIAA1161Q6NSJ0 714 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM81Q6P7N7 255 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SHC4Q6S5L8 630 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NIPA1Q7RTP0 329 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TIPARPQ7Z3E1 657 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ADGRD2Q7Z7M1 963 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FAM131BQ86XD5 332 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 HPS6Q86YV9 775 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 GSTCDQ8NEC7 633 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 OR10H4Q8NGA5 316 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ROBO4Q8WZ75 1007 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MTERF3Q96E29 417 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SDSLQ96GA7 329 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ACSS3Q9H6R3 686 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BEX4Q9NWD9 120 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SMPD3Q9NY59 655 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BCAP29Q9UHQ4 241 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF225Q9UK10 706 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MAGEA13PA6NCF6 341 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MEIS3P2A8K0S8 358 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FAM86B1E9PN63 330 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 AGPSO00116 658 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 LATO43561 262 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CALUO43852 315 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 AOC2O75106 756 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FGGP02679 453 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CHRNGP07510 517 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DRD2P14416 443 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 G0S2P27469 103 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 GPC1P35052 558 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 UGT2B10P36537 528 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PREPP48147 710 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SP140Q13342 867 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DRAP1Q14919 205 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 P2RY14Q15391 338 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SPDYE7PQ495Y7 208 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ATP13A5Q4VNC0 1218 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TTC23LQ6PF05 361 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CCBE1Q6UXH8 406 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TRAPPC11Q7Z392 1133 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DSELQ8IZU8 1212 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 C1orf87Q8N0U7 546 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 GLIS3Q8NEA6 775 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF398Q8TD17 642 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TSPEARQ8WU66 669 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 METTL21AQ8WXB1 218 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 LPAR1Q92633 364 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 UTP4Q969X6 686 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NACC2Q96BF6 587 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SLC22A18Q96BI1 424 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ZBTB9Q96C00 473 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 RASD2Q96D21 266 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DTNBP1Q96EV8 351 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PARK7Q99497 189 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ASCL2Q99929 193 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PDCD2LQ9BRP1 358 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SPACA1Q9HBV2 294 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SLC39A2Q9NP94 309 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ATP13A2Q9NQ11 1180 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PLA2G3Q9NZ20 509 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ACSL6Q9UKU0 697 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NFU1Q9UMS0 254 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CDC14AQ9UNH5 594 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ERVK-11Q9UQG0 969 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MRPS33Q9Y291 106 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 AP4B1Q9Y6B7 739 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 LCTP09848 1927 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 SNTNA6NMZ2 147 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 OGG1O15527 345 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 KRT8P05787 483 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 FAM86B2P0C5J1 330 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 CASP14P31944 242 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 MMP13P45452 471 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 NDST1P52848 882 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 KIAA1024LP59773 190 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 BYSLQ13895 437 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 KEAP1Q14145 624 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 ADRM1Q16186 407 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 BAK1Q16611 211 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 FIGNQ5HY92 759 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM225Q6GV28 225 aa3.84□□□□□ -1.79
NEDD4-209ENST00000508871 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
NEDD4-209ENST00000508871 FRA10AC1Q70Z53 315 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms