RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ULK4Q96C45 1275 aa14.18□□□□□ -0.14
DDX41-208ENST00000507955 BIRC7Q96CA5 298 aa14.18□□□□□ -0.14
DDX41-208ENST00000507955 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
DDX41-208ENST00000507955 AGPAT4Q9NRZ5 378 aa14.18□□□□□ -0.14
DDX41-208ENST00000507955 ZDHHC3Q9NYG2 299 aa14.18□□□□□ -0.14
DDX41-208ENST00000507955 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 STK16O75716 305 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ADH1AP07327 375 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PABPC1P11940 636 aaKnown RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 EPB42P16452 691 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PPM1AP35813 382 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 MAPK8P45983 427 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 GPR33Q49SQ1 333 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 UBE2R2Q712K3 238 aaPredicted RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 FAM86B1Q8N7N1 296 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 AURKBQ96GD4 344 aaPredicted RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 TBCDQ9BTW9 1192 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ACTR8Q9H981 624 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 CLK4Q9HAZ1 481 aaKnown RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 MAGED1Q9Y5V3 778 aaPredicted RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 PLXNB3Q9ULL4 1909 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 A0A0J9YVX5 310 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 RNF103-CHMP3A0A140T963 221 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 AQP12BA6NM10 295 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PER2O15055 1255 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PRAMEF4O60810 478 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 SH3BGRLO75368 114 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 LEFTY1O75610 366 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PDYNP01213 254 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 IL10P22301 178 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 IRS1P35568 1242 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 SPINT3P49223 89 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 BNIP2Q12982 314 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 INPP5AQ14642 412 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ARSIQ5FYB1 569 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PRAMEF9Q5VWM5 478 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 SULT1C3Q6IMI6 304 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ANKRD46Q86W74 232 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 HID1Q8IV36 788 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 AQP12AQ8IXF9 295 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 PHACTR4Q8IZ21 702 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 C10orf111Q8N326 155 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 DTWD1Q8N5C7 304 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 IRF7Q92985 503 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ISG20Q96AZ6 181 aaKnown RBP14.17□□□□□ -0.14
DDX41-208ENST00000507955 RNF145Q96MT1 663 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 P2RY13Q9BPV8 354 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 EBF1Q9UH73 591 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 SLC25A13Q9UJS0 675 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 UTS2RQ9UKP6 389 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 DLGAP4Q9Y2H0 992 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 ZNF510Q9Y2H8 683 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 LTBP2Q14767 1821 aa14.17□□□□□ -0.14
DDX41-208ENST00000507955 GRM6O15303 877 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 LRATO95237 230 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 GSNP06396 782 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 VARSP26640 1264 aaKnown RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 METAP1P53582 386 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 KIAA0040Q15053 153 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 SF1Q15637 639 aaKnown RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 IMPG1Q17R60 797 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 COQ5Q5HYK3 327 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 IRAK1BP1Q5VVH5 260 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 GLYATQ6IB77 296 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 NEK5Q6P3R8 708 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 TBPL2Q6SJ96 375 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 CCDC149Q6ZUS6 474 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 CBARPQ8N350 705 aaPredicted RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 LMNTD1Q8N9Z9 388 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 OR10Q1Q8NGQ4 319 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 LYSMD1Q96S90 227 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 CGREF1Q99674 301 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 TIMMDC1Q9NPL8 285 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 TDP1Q9NUW8 608 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 SLC22A14Q9Y267 594 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 ITM2BQ9Y287 266 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 KANSL1LA0AUZ9 987 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 MANBAO00462 879 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 AREL1O15033 823 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 ACOX3O15254 700 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 POP4O95707 220 aaKnown RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 CTSLP07711 333 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 RHOP08100 348 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 EPCAMP16422 314 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 TACR1P25103 407 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 FASP25445 335 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 GALK1P51570 392 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 PPP1R8Q12972 351 aaKnown RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 GRIK2Q13002 908 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 PTCHD3Q3KNS1 767 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 ERI1Q8IV48 349 aaKnown RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 ZNF786Q8N393 782 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 MFSD2AQ8NA29 543 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 OR10A6Q8NH74 314 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 FBXL20Q96IG2 436 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 EGLN2Q96KS0 407 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 LRRC3BQ96PB8 259 aa14.16□□□□□ -0.14
DDX41-208ENST00000507955 MCCC1Q96RQ3 725 aaPredicted RBP14.16□□□□□ -0.14
DDX41-208ENST00000507955 ACPTQ9BZG2 426 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms