RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CDKL1Q00532 357 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 NFKB2Q00653 900 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 ELOCQ15369 112 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 RPE65Q16518 533 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 KIF19Q2TAC6 998 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 UNC50Q53HI1 259 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 ZNF678Q5SXM1 525 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 ANKS6Q68DC2 871 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 GKN2Q86XP6 184 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 RASGRP3Q8IV61 690 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 TCAIMQ8N3R3 496 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 PDPRQ8NCN5 879 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 RHBDF1Q96CC6 855 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 HGH1Q9BTY7 390 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 LRRC61Q9BV99 259 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 CCDC134Q9H6E4 229 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 HEBP2Q9Y5Z4 205 aa17.01■□□□□ 0.31
RNF4-209ENST00000507784 ZDBF2Q9HCK1 2354 aa17■□□□□ 0.31
RNF4-209ENST00000507784 GMNCA6NCL1 334 aa17■□□□□ 0.31
RNF4-209ENST00000507784 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
RNF4-209ENST00000507784 TMEM114B3SHH9 223 aa17■□□□□ 0.31
RNF4-209ENST00000507784 TAPBPO15533 448 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ITM2AO43736 263 aa17■□□□□ 0.31
RNF4-209ENST00000507784 CCNT2O60583 730 aaKnown RBP17■□□□□ 0.31
RNF4-209ENST00000507784 LYPLA1O75608 230 aaPredicted RBP17■□□□□ 0.31
RNF4-209ENST00000507784 HSPA4LO95757 839 aa17■□□□□ 0.31
RNF4-209ENST00000507784 DPP6P42658 865 aa17■□□□□ 0.31
RNF4-209ENST00000507784 SEC24CP53992 1094 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ABCE1P61221 599 aaKnown RBP17■□□□□ 0.31
RNF4-209ENST00000507784 HERVK_113P63132 956 aa17■□□□□ 0.31
RNF4-209ENST00000507784 DUOXA1Q1HG43 343 aa17■□□□□ 0.31
RNF4-209ENST00000507784 WASH2PQ6VEQ5 465 aa17■□□□□ 0.31
RNF4-209ENST00000507784 RPS27LQ71UM5 84 aaKnown RBP17■□□□□ 0.31
RNF4-209ENST00000507784 DCUN1D3Q8IWE4 304 aa17■□□□□ 0.31
RNF4-209ENST00000507784 TBC1D21Q8IYX1 336 aa17■□□□□ 0.31
RNF4-209ENST00000507784 LRRC34Q8IZ02 419 aa17■□□□□ 0.31
RNF4-209ENST00000507784 FAM46DQ8NEK8 389 aa17■□□□□ 0.31
RNF4-209ENST00000507784 OR9A1PQ8NGU1 263 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ATL1Q8WXF7 558 aa17■□□□□ 0.31
RNF4-209ENST00000507784 TMEM131Q92545 1883 aa17■□□□□ 0.31
RNF4-209ENST00000507784 RAD51AP1Q96B01 352 aa17■□□□□ 0.31
RNF4-209ENST00000507784 FBXL8Q96CD0 374 aa17■□□□□ 0.31
RNF4-209ENST00000507784 CXorf40BQ96DE9 158 aa17■□□□□ 0.31
RNF4-209ENST00000507784 L3HYPDHQ96EM0 354 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ERVK-6Q9BXR3 956 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ATG10Q9H0Y0 220 aa17■□□□□ 0.31
RNF4-209ENST00000507784 RABEP2Q9H5N1 569 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ZNF395Q9H8N7 513 aaPredicted RBP17■□□□□ 0.31
RNF4-209ENST00000507784 WASH6PQ9NQA3 447 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ABCF3Q9NUQ8 709 aa17■□□□□ 0.31
RNF4-209ENST00000507784 PTBP2Q9UKA9 531 aaKnown RBP17■□□□□ 0.31
RNF4-209ENST00000507784 RAB23Q9ULC3 237 aa17■□□□□ 0.31
RNF4-209ENST00000507784 PLAGL1Q9UM63 463 aa17■□□□□ 0.31
RNF4-209ENST00000507784 ANGPTL3Q9Y5C1 460 aa17■□□□□ 0.31
RNF4-209ENST00000507784 TNPO3Q9Y5L0 923 aaKnown RBP17■□□□□ 0.31
RNF4-209ENST00000507784 COLEC10Q9Y6Z7 277 aa17■□□□□ 0.31
RNF4-209ENST00000507784 R4GN57 208 aa17■□□□□ 0.31
RNF4-209ENST00000507784 KLF11O14901 512 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 NPHS1O60500 1241 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 SDC3O75056 442 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 MTHFD1P11586 935 aaKnown RBP16.99■□□□□ 0.31
RNF4-209ENST00000507784 F3P13726 295 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 TSPAN8P19075 237 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CTSKP43235 329 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CCR10P46092 362 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 NUBP1P53384 320 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
RNF4-209ENST00000507784 RCN2Q14257 317 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CDKL4Q5MAI5 379 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CES4AQ5XG92 561 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 RGS9BPQ6ZS82 235 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 FBXO15Q8NCQ5 510 aaPredicted RBP16.99■□□□□ 0.31
RNF4-209ENST00000507784 OR5K2Q8NHB8 316 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CEP76Q8TAP6 659 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 ZDHHC1Q8WTX9 485 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CHMP6Q96FZ7 201 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CNDP1Q96KN2 507 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CAMK1GQ96NX5 476 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 TMEM79Q9BSE2 394 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 PITPNM3Q9BZ71 974 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 CD244Q9BZW8 370 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 FAM107BQ9H098 131 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 MVB12BQ9H7P6 319 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 THAP1Q9NVV9 213 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 POLG2Q9UHN1 485 aa16.99■□□□□ 0.31
RNF4-209ENST00000507784 B4DGG1 531 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 AQP9O43315 295 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 STK16O75716 305 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 ANXA6P08133 673 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 SLC2A4P14672 509 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 GDF5P43026 501 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 HNMTP50135 292 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 CDH13P55290 713 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 BNC1Q01954 994 aa16.98■□□□□ 0.31
RNF4-209ENST00000507784 RBBP7Q16576 425 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms