RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 MTG2Q9H4K7 406 aa21.54■■□□□ 1.04
SPCS3-203ENST00000507678 NDUFA13Q9P0J0 144 aa21.54■■□□□ 1.04
SPCS3-203ENST00000507678 MAGED1Q9Y5V3 778 aaPredicted RBP21.54■■□□□ 1.04
SPCS3-203ENST00000507678 ABHD14A-ACY1A0A1B0GW23 586 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 ITPKAP23677 461 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 MRPL19P49406 292 aaKnown RBP21.53■■□□□ 1.04
SPCS3-203ENST00000507678 PWP1Q13610 501 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 MAP7Q14244 749 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 INTS11Q5TA45 600 aaKnown RBP21.53■■□□□ 1.04
SPCS3-203ENST00000507678 TBPL2Q6SJ96 375 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 FAM86B1Q8N7N1 296 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 ITFG1Q8TB96 612 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 AURKBQ96GD4 344 aaPredicted RBP21.53■■□□□ 1.04
SPCS3-203ENST00000507678 LINC00597Q9H2U6 94 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 OBSL1O75147 1896 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 GSTA4O15217 222 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 LRATO95237 230 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 GSNP06396 782 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 C1SP09871 688 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 CACHD1Q5VU97 1274 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 DPP10Q8N608 796 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 ABTB1Q969K4 478 aaPredicted RBP21.53■■□□□ 1.04
SPCS3-203ENST00000507678 ATG10Q9H0Y0 220 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 SLC25A13Q9UJS0 675 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 CHD7Q9P2D1 2997 aa21.53■■□□□ 1.04
SPCS3-203ENST00000507678 WDR47O94967 919 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 SNAP29O95721 258 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 PDYNP01213 254 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 JAK1P23458 1154 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 CSNK1DP48730 415 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 PLCL1Q15111 1095 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 ZXDCQ2QGD7 858 aaPredicted RBP21.52■■□□□ 1.04
SPCS3-203ENST00000507678 TMTC4Q5T4D3 741 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 CYB5D2Q8WUJ1 264 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 SELENOMQ8WWX9 145 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 TSSK3Q96PN8 268 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 ZBP1Q9H171 429 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPCS3-203ENST00000507678 LILRB3O75022 631 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 GMNNO75496 209 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 CLTBP09497 229 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 PPP1R8Q12972 351 aaKnown RBP21.52■■□□□ 1.04
SPCS3-203ENST00000507678 MPP7Q5T2T1 576 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 TBC1D21Q8IYX1 336 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 ZNF366Q8N895 744 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 OR52E6Q96RD3 313 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 HAUS8Q9BT25 410 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 GMEB1Q9Y692 573 aa21.52■■□□□ 1.04
SPCS3-203ENST00000507678 OR2AG2A6NM03 316 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 UPK3BL1B0FP48 263 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 UPK3BL2E5RIL1 263 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 SLC28A1O00337 649 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 CLOCKO15516 846 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 CLDN9O95484 217 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 PGRP06401 933 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 OR56A5P0C7T3 313 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 EBLN1P0CF75 366 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 FCGR1AP12314 374 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 SFSWAPQ12872 951 aaKnown RBP21.52■■□□□ 1.03
SPCS3-203ENST00000507678 CARD16Q5EG05 197 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 PROSER1Q86XN7 944 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 CBARPQ8N350 705 aaPredicted RBP21.52■■□□□ 1.03
SPCS3-203ENST00000507678 OR2T12Q8NG77 320 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 GTF2H4Q92759 462 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 TOX2Q96NM4 488 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 ACPTQ9BZG2 426 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 CLK4Q9HAZ1 481 aaKnown RBP21.52■■□□□ 1.03
SPCS3-203ENST00000507678 SLC6A13Q9NSD5 602 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 TMPRSS11EQ9UL52 423 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 DLGAP4Q9Y2H0 992 aa21.52■■□□□ 1.03
SPCS3-203ENST00000507678 PABPN1LA6NDY0 278 aaKnown RBP21.51■■□□□ 1.03
SPCS3-203ENST00000507678 RASAL1O95294 804 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 EPORP19235 508 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 TEAD2Q15562 447 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 GCNT7Q6ZNI0 430 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 ZNF583Q96ND8 569 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 RBM38Q9H0Z9 239 aaKnown RBP21.51■■□□□ 1.03
SPCS3-203ENST00000507678 MUC13Q9H3R2 512 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 EPB41L1Q9H4G0 881 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 LIN28AQ9H9Z2 209 aaKnown RBP21.51■■□□□ 1.03
SPCS3-203ENST00000507678 LIMD1Q9UGP4 676 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 UTS2RQ9UKP6 389 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 SLC22A14Q9Y267 594 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 NEUROG3Q9Y4Z2 214 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 CTSAP10619 480 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 RPS9P46781 194 aaKnown RBP21.51■■□□□ 1.03
SPCS3-203ENST00000507678 IST1P53990 364 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 LAPTM5Q13571 262 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 KIAA0040Q15053 153 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 PTCHD3Q3KNS1 767 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 IRAK1BP1Q5VVH5 260 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 ENPP6Q6UWR7 440 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 OR10Q1Q8NGQ4 319 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 SNRNP27Q8WVK2 155 aaKnown RBP21.51■■□□□ 1.03
SPCS3-203ENST00000507678 ELOVL6Q9H5J4 265 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 PARVBQ9HBI1 364 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 MAGEL2Q9UJ55 1249 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 DMTF1Q9Y222 760 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 HS3ST2Q9Y278 367 aa21.51■■□□□ 1.03
SPCS3-203ENST00000507678 PCDHB3Q9Y5E6 796 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms