RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 OR2AJ1Q8NGZ0 328 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 OR14A16Q8NHC5 309 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 CTCFLQ8NI51 663 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 DENND1AQ8TEH3 1009 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 CORO2AQ92828 525 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPDL1Q96EA4 605 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 HES6Q96HZ4 224 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 SFXN2Q96NB2 322 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 CAMK1GQ96NX5 476 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC25A33Q9BSK2 321 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 C16orf70Q9BSU1 422 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 MLPHQ9BV36 600 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 FNDC11Q9BVV2 318 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 RETREG1Q9H6L5 497 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 HHATLQ9HCP6 504 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 HIF1ANQ9NWT6 349 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 C11orf21Q9P2W6 132 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 ARMCX3Q9UH62 379 aaPredicted RBP3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 AGO1Q9UL18 857 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 PADI3Q9ULW8 664 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 GRIP1Q9Y3R0 1128 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 SNX9Q9Y5X1 595 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 PTGDR2Q9Y5Y4 395 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF804BA4D1E1 1349 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 TTC21BQ7Z4L5 1316 aa3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 PARP4Q9UKK3 1724 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-205ENST00000506426 NINLQ9Y2I6 1382 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TRPM1Q7Z4N2 1603 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 CD163L1Q9NR16 1453 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 A0A1B0GVT2 93 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 OR2M5A3KFT3 312 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 A4D1N5 150 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 INAFM1C9JVW0 142 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 CLDN4O14493 209 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MEIS2O14770 477 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TNFRSF13BO14836 293 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF263O14978 683 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 BUD23O43709 281 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 DDNO94850 711 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 VIMP08670 466 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 RAB40ALP0C0E4 278 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TNFRSF1BP20333 461 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 LMO1P25800 156 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ATP6V1E1P36543 226 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 HNF4AP41235 474 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ASCL1P50553 236 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 PLCD1P51178 756 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 HNRNPKP61978 463 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SSBP2P81877 361 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 UBXN1Q04323 297 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 CRYZQ08257 329 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 PLA2G7Q13093 441 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 HNRNPA0Q13151 305 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MORF4L2Q15014 288 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 RABEP1Q15276 862 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MEP1BQ16820 701 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF674Q2M3X9 581 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKRD20A4Q4UJ75 823 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKRD20A8PQ5CZ79 823 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKRD20A2Q5SQ80 823 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKRD20A1Q5TYW2 823 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM69BQ5VUD6 431 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ANKRD20A3Q5VUR7 823 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SHEQ5VZ18 495 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM91A1Q658Y4 838 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM122CQ6P4D5 195 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MEPCEQ7L2J0 689 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ATG9AQ7Z3C6 839 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TLK2Q86UE8 772 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 GLCCI1Q86VQ1 547 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 DZIP1Q86YF9 867 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TUSC5Q8IXB3 177 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF34Q8IZ26 560 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 C1orf52Q8N6N3 182 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ATAD1Q8NBU5 361 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 OR5R1Q8NH85 324 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MOSPD2Q8NHP6 518 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FIBINQ8TAL6 211 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 GRAPLQ8TC17 118 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC44A1Q8WWI5 657 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 WASF1Q92558 559 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 PTP4A1Q93096 173 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZG16BQ96DA0 208 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MTBPQ96DY7 904 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 MTERF3Q96E29 417 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 INTS14Q96SY0 518 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLX1AQ9BQ83 275 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 INPP5KQ9BT40 448 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPRY4Q9C004 299 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 RBM38Q9H0Z9 239 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 SEMA6AQ9H2E6 1030 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FOXP1Q9H334 677 aaPredicted RBP3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 FZD8Q9H461 694 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TBC1D17Q9HA65 648 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TRPV4Q9HBA0 871 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 NOX4Q9NPH5 578 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZBTB40Q9NUA8 1239 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 ADPRHL2Q9NX46 363 aa3.12□□□□□ -1.91
TRAPPC11-205ENST00000506426 TBC1D7Q9P0N9 293 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms