RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PYROXD1Q8WU10 500 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 KLHL6Q8WZ60 621 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 FBXO8Q9NRD0 319 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 OCIAD1Q9NX40 245 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 GRHL1Q9NZI5 618 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 ZFATQ9P243 1243 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 ICKQ9UPZ9 632 aa16.2■□□□□ 0.18
SNCA-209ENST00000506244 C9orf172C9J069 976 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 STMND1H3BQB6 276 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 EIF3FO00303 357 aaPredicted RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 BTN3A1O00481 513 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 POLR1CO15160 346 aaPredicted RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 ZBTB11O95625 1053 aaPredicted RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 LIPCP11150 499 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 ENO3P13929 434 aaPredicted RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 NELFEP18615 380 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 RAB28P51157 221 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 PLTPP55058 493 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 UCNP55089 124 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 PPP1CAP62136 330 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 ABRQ12979 859 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 GBX1Q14549 363 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 TMTC4Q5T4D3 741 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 NEK10Q6ZWH5 1172 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 SIDT2Q8NBJ9 832 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 FAM136AQ96C01 138 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 SLC41A2Q96JW4 573 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 MAP3K3Q99759 626 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 WDR83Q9BRX9 315 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 AARSD1Q9BTE6 412 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 FAM129AQ9BZQ8 928 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 SAYSD1Q9NPB0 183 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 FAM114A2Q9NRY5 505 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 C1GALT1Q9NS00 363 aa16.19■□□□□ 0.18
SNCA-209ENST00000506244 SIDT1Q9NXL6 827 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 TRMT6Q9UJA5 497 aaKnown RBP16.19■□□□□ 0.18
SNCA-209ENST00000506244 PIPSLA2A3N6 862 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.18■□□□□ 0.18
SNCA-209ENST00000506244 KIF1CO43896 1103 aaKnown RBP16.18■□□□□ 0.18
SNCA-209ENST00000506244 HAUS5O94927 633 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CBSLP0DN79 551 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CDH3P22223 829 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 PKLRP30613 574 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CBSP35520 551 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CLCN7P51798 805 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 KPNA2P52292 529 aaKnown RBP16.18■□□□□ 0.18
SNCA-209ENST00000506244 HSD11B2P80365 405 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 ACY1Q03154 408 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 FOXM1Q08050 763 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 MGAT5Q09328 741 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 IL11RAQ14626 422 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 FASTKD3Q14CZ7 662 aaKnown RBP16.18■□□□□ 0.18
SNCA-209ENST00000506244 CNSTQ6PJW8 725 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CEP128Q6ZU80 1094 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 MMGT1Q8N4V1 131 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 CDKL2Q92772 493 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 RAD51AP1Q96B01 352 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 PDE7BQ9NP56 450 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 SOHLH2Q9NX45 425 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 TAS2R13Q9NYV9 303 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 ACTR10Q9NZ32 417 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 SLC39A10Q9ULF5 831 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 B3GALT1Q9Y5Z6 326 aa16.18■□□□□ 0.18
SNCA-209ENST00000506244 URB1O60287 2271 aaKnown RBP16.18■□□□□ 0.18
SNCA-209ENST00000506244 IGHV5-51A0A0C4DH38 117 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 BTN3A3O00478 584 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 CATP04040 527 aaKnown RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 CHRM5P08912 532 aaPredicted RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 GSTA2P09210 222 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 SKIV2L2P42285 1042 aaKnown RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 ATP1A2P50993 1020 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 KIR2DS3Q14952 304 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 KYNUQ16719 465 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 GLE1Q53GS7 698 aaKnown RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 TEDDM1Q5T9Z0 273 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 ANKS6Q68DC2 871 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 ZNF549Q6P9A3 640 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 TRMT10BQ6PF06 316 aaKnown RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 SPESP1Q6UW49 350 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 BPHLQ86WA6 291 aaPredicted RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 SLC26A11Q86WA9 606 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 SPACA3Q8IXA5 215 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 PALM2Q8IXS6 379 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 ADGRF3Q8IZF5 1079 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 FBXO25Q8TCJ0 367 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 INPP5DQ92835 1189 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 SLC22A18Q96BI1 424 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 NAF1Q96HR8 494 aaKnown RBP16.17■□□□□ 0.18
SNCA-209ENST00000506244 GPR21Q99679 349 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 PITPNM3Q9BZ71 974 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 XKR8Q9H6D3 395 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 FANCEQ9HB96 536 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 PLAC1Q9HBJ0 212 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 SPATA7Q9P0W8 599 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 BTRCQ9Y297 605 aa16.17■□□□□ 0.18
SNCA-209ENST00000506244 DHRS7Q9Y394 339 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms