RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 GTF2H1P32780 548 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 RFC3P40938 356 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CCNFP41002 786 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 NSG1P42857 185 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 STC1P52823 247 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CASP9P55211 416 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ATP5J2P56134 94 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 VSX2P58304 361 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 POLR2LP62875 67 aaKnown RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 VLDLRP98155 873 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 EEF1A2Q05639 463 aaKnown RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ENPEPQ07075 957 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TRAF2Q12933 501 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PDCLQ13371 301 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FASTKQ14296 549 aaKnown RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 BECN1Q14457 450 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 IHHQ14623 411 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 STILQ15468 1287 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 E2F4Q16254 413 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CAMK4Q16566 473 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CBWD6Q4V339 395 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TFDP3Q5H9I0 405 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CBWD3Q5JTY5 395 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ACER2Q5QJU3 275 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CBWD5Q5RIA9 395 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FAM120AOSQ5T036 256 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CFAP58Q5T655 872 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 RRAGBQ5VZM2 374 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 LRRC66Q68CR7 880 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 KRT39Q6A163 491 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ACAD10Q6JQN1 1059 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ARHGAP11AQ6P4F7 1023 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 KLHL35Q6PF15 583 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 SHC4Q6S5L8 630 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM270Q6UE05 265 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CRTC3Q6UUV7 619 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 B3GNT6Q6ZMB0 384 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 Q6ZPA2 131 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FAM83HQ6ZRV2 1179 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FAM183BPQ6ZVS7 135 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 SLC26A9Q7LBE3 791 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ADGRG6Q86SQ4 1221 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 OOSP2Q86WS3 158 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM178AQ8NBL3 297 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FBXL13Q8NEE6 735 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF397Q8NF99 534 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 OR5M9Q8NGP3 310 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FLVCR1-AS1Q8TAF5 88 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ZFAND2BQ8WV99 257 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PIH1D2Q8WWB5 315 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 SCRN2Q96FV2 425 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TBCBQ99426 244 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PKP2Q99959 881 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TIMM29Q9BSF4 260 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 YIPF4Q9BSR8 244 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CRB3Q9BUF7 120 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF747Q9BV97 191 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 SLC7A5P2Q9GIP4 190 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CHRNA10Q9GZZ6 450 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 OR2AG1Q9H205 316 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 KIR3DX1Q9H7L2 352 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 MMRN2Q9H8L6 949 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 UBTD1Q9HAC8 227 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PLCB1Q9NQ66 1216 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 ENAMQ9NRM1 1142 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 C6orf203Q9P0P8 240 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 B4GALT7Q9UBV7 327 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TRIM10Q9UDY6 481 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 SLC24A2Q9UI40 661 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FOXD3Q9UJU5 478 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FBXO2Q9UK22 296 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PLCE1Q9P212 2302 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 NINQ8N4C6 2090 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 LYSTQ99698 3801 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 A0A1B0GX78 115 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SH3D21A4FU49 640 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 USP27XA6NNY8 438 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 GPR89AB7ZAQ6 455 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NPIPA2E9PIF3 369 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 C3orf80F5H4A9 247 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 NPIPA3F8WFD2 350 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 TGFBR3LH3BV60 316 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 BTN3A1O00481 513 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CES2O00748 559 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 GAPDHSO14556 408 aaPredicted RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 CDC40O60508 579 aaKnown RBP eCLIP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 LMX1BO60663 402 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PRAMEF11O60813 436 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ADAM11O75078 769 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 SLC25A12O75746 678 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 WFS1O76024 890 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PDE9AO76083 593 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PYGLP06737 847 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PDHA1P08559 390 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ZGLP1P0C6A0 271 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 GPR89BP0CG08 455 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 IGHV4-31P0DP07 118 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 ARAFP10398 606 aa3.15□□□□□ -1.91
TCOF1-208ENST00000506063 MTHFD1P11586 935 aaKnown RBP3.15□□□□□ -1.91
TCOF1-208ENST00000506063 PDIA4P13667 645 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms