RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TEX26Q8N6G2 289 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 LILRB4Q8NHJ6 448 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ASB5Q8WWX0 329 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 LCN9Q8WX39 176 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
LSM6-204ENST00000504181 CTSFQ9UBX1 484 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
LSM6-204ENST00000504181 RNF6Q9Y252 685 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 SONP18583 2426 aaKnown RBP12.01□□□□□ -0.49
LSM6-204ENST00000504181 ARHGAP21Q5T5U3 1957 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 NSG1A0A0A6YYJ2 146 aa12□□□□□ -0.49
LSM6-204ENST00000504181 WFS1O76024 890 aa12□□□□□ -0.49
LSM6-204ENST00000504181 FGFR1OPO95684 399 aaKnown RBP12□□□□□ -0.49
LSM6-204ENST00000504181 ALBP02768 609 aa12□□□□□ -0.49
LSM6-204ENST00000504181 CALB1P05937 261 aa12□□□□□ -0.49
LSM6-204ENST00000504181 SLC35G4P0C7Q5 338 aa12□□□□□ -0.49
LSM6-204ENST00000504181 MYBL2P10244 700 aa12□□□□□ -0.49
LSM6-204ENST00000504181 DESP17661 470 aa12□□□□□ -0.49
LSM6-204ENST00000504181 AMPD1P23109 780 aa12□□□□□ -0.49
LSM6-204ENST00000504181 NDUFS1P28331 727 aa12□□□□□ -0.49
LSM6-204ENST00000504181 CHRNB4P30926 498 aa12□□□□□ -0.49
LSM6-204ENST00000504181 NSG1P42857 185 aa12□□□□□ -0.49
LSM6-204ENST00000504181 ZIC1Q15915 447 aa12□□□□□ -0.49
LSM6-204ENST00000504181 SLC5A12Q1EHB4 618 aa12□□□□□ -0.49
LSM6-204ENST00000504181 TFDP3Q5H9I0 405 aa12□□□□□ -0.49
LSM6-204ENST00000504181 TMEM220Q6QAJ8 160 aa12□□□□□ -0.49
LSM6-204ENST00000504181 TMCO3Q6UWJ1 677 aa12□□□□□ -0.49
LSM6-204ENST00000504181 PAMR1Q6UXH9 720 aa12□□□□□ -0.49
LSM6-204ENST00000504181 CHSY3Q70JA7 882 aa12□□□□□ -0.49
LSM6-204ENST00000504181 HOOK3Q86VS8 718 aa12□□□□□ -0.49
LSM6-204ENST00000504181 BEND7Q8N7W2 519 aaPredicted RBP12□□□□□ -0.49
LSM6-204ENST00000504181 RASGEF1AQ8N9B8 481 aa12□□□□□ -0.49
LSM6-204ENST00000504181 ACVR1CQ8NER5 493 aa12□□□□□ -0.49
LSM6-204ENST00000504181 GOT1L1Q8NHS2 421 aaPredicted RBP12□□□□□ -0.49
LSM6-204ENST00000504181 RMDN2Q96LZ7 410 aa12□□□□□ -0.49
LSM6-204ENST00000504181 TUBGCP2Q9BSJ2 902 aa12□□□□□ -0.49
LSM6-204ENST00000504181 CRB3Q9BUF7 120 aa12□□□□□ -0.49
LSM6-204ENST00000504181 RNF32Q9H0A6 362 aa12□□□□□ -0.49
LSM6-204ENST00000504181 RAD18Q9NS91 495 aa12□□□□□ -0.49
LSM6-204ENST00000504181 FANCLQ9NW38 375 aa12□□□□□ -0.49
LSM6-204ENST00000504181 IL17CQ9P0M4 197 aa12□□□□□ -0.49
LSM6-204ENST00000504181 COLEC10Q9Y6Z7 277 aa12□□□□□ -0.49
LSM6-204ENST00000504181 TCRBV5S1A1TA0A578 114 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 C2orf74A8MZ97 194 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 F8VZ95 297 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 ASNA1O43681 348 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 PRPSAP2O60256 369 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 GFPT2O94808 682 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 RAF1P04049 648 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 PIM1P11309 404 aaPredicted RBP11.99□□□□□ -0.49
LSM6-204ENST00000504181 FDXRP22570 491 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 HCAR3P49019 387 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 NIPAL4Q0D2K0 466 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 ALG1LQ6GMV1 187 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 DCUN1D2Q6PH85 259 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 CDC20BQ86Y33 519 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 KRTAP1-3Q8IUG1 177 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 CHERPQ8IWX8 916 aaKnown RBP11.99□□□□□ -0.49
LSM6-204ENST00000504181 PRSS58Q8IYP2 241 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
LSM6-204ENST00000504181 CLYBLQ8N0X4 340 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 GHDCQ8N2G8 530 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 METTL27Q8N6F8 245 aaPredicted RBP11.99□□□□□ -0.49
LSM6-204ENST00000504181 ARRDC2Q8TBH0 407 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 DLG3Q92796 817 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 HDAC10Q969S8 669 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 PCDHB18PQ96TA0 734 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 HES7Q9BYE0 225 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 SLC26A1Q9H2B4 701 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 NLRC4Q9NPP4 1024 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 KLHL1Q9NR64 748 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 ACTR10Q9NZ32 417 aa11.99□□□□□ -0.49
LSM6-204ENST00000504181 ZNF407Q9C0G0 2248 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 A0A1B0GX78 115 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 TTI1O43156 1089 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 KLK8O60259 260 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 BMP10O95393 424 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 SERPINA7P05543 415 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 TPOP07202 933 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 ITGAMP11215 1152 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 COX6A1P12074 109 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 MTIF2P46199 727 aaKnown RBP11.98□□□□□ -0.49
LSM6-204ENST00000504181 EEF1A2Q05639 463 aaKnown RBP11.98□□□□□ -0.49
LSM6-204ENST00000504181 ABHD17BQ5VST6 288 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 CNSTQ6PJW8 725 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 NAPRTQ6XQN6 538 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 CYP4V2Q6ZWL3 525 aaPredicted RBP11.98□□□□□ -0.49
LSM6-204ENST00000504181 MON1BQ7L1V2 547 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 TMC3Q7Z5M5 1100 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 FGD2Q7Z6J4 655 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 CCDC71Q8IV32 467 aaPredicted RBP11.98□□□□□ -0.49
LSM6-204ENST00000504181 AMER2Q8N7J2 671 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 BRSK1Q8TDC3 778 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 TRIM51Q9BSJ1 452 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 GPR63Q9BZJ6 419 aa11.98□□□□□ -0.49
LSM6-204ENST00000504181 XKR8Q9H6D3 395 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms