RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CHADLQ6NUI6 762 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DPY19L3Q6ZPD9 716 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DENND5BQ6ZUT9 1274 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 NOXA1Q86UR1 476 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 BBS7Q8IWZ6 715 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PLD6Q8N2A8 252 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CCNYL1Q8N7R7 359 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF781Q8N8C0 355 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ATAD1Q8NBU5 361 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OR13J1Q8NGT2 312 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 FEZF2Q8TBJ5 459 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 NXPE3Q969Y0 559 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 SMIM10Q96HG1 83 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ALPK1Q96QP1 1244 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DNTTIP1Q9H147 329 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM245Q9H330 911 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DSN1Q9H410 356 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OLA1Q9NTK5 396 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DTLQ9NZJ0 730 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CHORDC1Q9UHD1 332 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 BAIAP2Q9UQB8 552 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CDYLQ9Y232 598 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TRAF6Q9Y4K3 522 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 IGLV3-12A0A075B6K2 115 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 A0A1B0GVI7 797 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ATP6AP2A0A1C7CYW4 349 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PIPSLA2A3N6 862 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 INO80B-WBP1J3KQ70 363 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 STX16O14662 325 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TNPO2O14787 897 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PLD2O14939 933 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 GATCO43716 136 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ORC5O43913 435 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 NRP2O60462 931 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 B3GALNT1O75752 331 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 UPK1BO75841 260 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OR2B3O76000 313 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 KLHL18O94889 574 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DHFRP00374 187 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CHRNA1P02708 482 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DLATP10515 647 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 IL7P13232 177 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 XRCC1P18887 633 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 LMO1P25800 156 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 RAB4BP61018 213 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 GNA12Q03113 381 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 RPS6KA2Q15349 733 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 HSDL1Q3SXM5 330 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PARP15Q460N3 678 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 YIF1BQ5BJH7 314 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CLLU1OSQ5K130 101 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 LRIF1Q5T3J3 769 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 LIPMQ5VYY2 423 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TTBK2Q6IQ55 1244 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ZYG11AQ6WRX3 759 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 KCTD8Q6ZWB6 473 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PLEKHM3Q6ZWE6 761 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OTOP3Q7RTS5 596 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 P3H2Q8IVL5 708 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ADHFE1Q8IWW8 467 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CBR4Q8N4T8 237 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ZFAND1Q8TCF1 268 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 KIAA1143Q96AT1 154 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CLPTM1LQ96KA5 538 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 MNTQ99583 582 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 EBNA1BP2Q99848 306 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TRIM54Q9BYV2 358 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CPEB1Q9BZB8 566 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 GSX2Q9BZM3 304 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 FAM83DQ9H4H8 585 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 DUSP21Q9H596 190 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 COQ10BQ9H8M1 238 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 KRT84Q9NSB2 600 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 MED9Q9NWA0 146 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 HMGXB4Q9UGU5 601 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 POU2F3Q9UKI9 436 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PRKAB1Q9Y478 270 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 NCKAP5O14513 1909 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CEP192Q8TEP8 1941 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CCDC78A2IDD5 438 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OR5K4A6NMS3 321 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 H3BM21 787 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 BTN3A1O00481 513 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ACOT8O14734 319 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CFLARO15519 480 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PSIP1O75475 530 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 RASGRP1O95267 797 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 MPOP05164 745 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PGK2P07205 417 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CYP11B1P15538 503 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TYRP1P17643 537 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CD72P21854 359 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ATP12AP54707 1039 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 EIF3IQ13347 325 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CEACAM7Q14002 265 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 SLC36A3Q495N2 470 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 FAM98BQ52LJ0 330 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 C6orf141Q5SZD1 244 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 SYT6Q5T7P8 510 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TIGD7Q6NT04 549 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms