RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	PROC	P04070	461 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ENO2	P09104	434 aa	Predicted RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RBP1	P09455	135 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NEFH	P12036	1026 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	XRCC1	P18887	633 aa	Predicted RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TGM1	P22735	817 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC19A1	P41440	591 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	BDKRB1	P46663	353 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ATXN3	P54252	364 aa	Predicted RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MPP2	Q14168	576 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KIR2DS5	Q14953	304 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCDC153	Q494R4	210 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	C6orf132	Q5T0Z8	1188 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TBC1D21	Q8IYX1	336 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PHC3	Q8NDX5	983 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC37A2	Q8TED4	501 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MRPL57	Q9BQC6	102 aa	Known RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MRPL46	Q9H2W6	279 aa	Known RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RDH14	Q9HBH5	336 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PARVB	Q9HBI1	364 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	INTS9	Q9NV88	658 aa	Known RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NLGN3	Q9NZ94	848 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OARD1	Q9Y530	152 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	HEBP2	Q9Y5Z4	205 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	HEATR5B	Q9P2D3	2071 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TRBV23OR9-2	A0A075B6M9	112 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	WDR91	A4D1P6	747 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TK2	O00142	265 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CDX4	O14627	284 aa	Predicted RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FFAR2	O15552	330 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CYP2A7	P20853	494 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC18A1	P54219	525 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UBE2I	P63279	158 aa	Known RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GRB7	Q14451	532 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TGFBI	Q15582	683 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCSMST1	Q4G0I0	132 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DCUN1D3	Q8IWE4	304 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ARMC2	Q8NEN0	867 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GPR156	Q8NFN8	814 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR4C6	Q8NH72	309 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FERD3L	Q96RJ6	166 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ASXL3	Q9C0F0	2248 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TRIT1	Q9H3H1	467 aa	Known RBP	13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MVB12B	Q9H7P6	319 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	POT1	Q9NUX5	634 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RNF112	Q9ULX5	631 aa		13.59	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PRAMEF33	A0A0G2JMD5	474 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TM9SF1	O15321	606 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RPN2	P04844	631 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TPBGL	P0DKB5	382 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MTHFD2	P13995	350 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NDUFS1	P28331	727 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ETV4	P43268	484 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RPIA	P49247	311 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CBX1	P83916	185 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CDKL1	Q00532	357 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	DBX2	Q6ZNG2	339 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MAPK15	Q8TD08	544 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MAGEC3	Q8TD91	643 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MCOLN3	Q8TDD5	553 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	DENND1A	Q8TEH3	1009 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CXorf40B	Q96DE9	158 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PHOX2B	Q99453	314 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	DUSP23	Q9BVJ7	150 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RXFP3	Q9NSD7	469 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	UTP6	Q9NYH9	597 aa	Known RBP	13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SIRPG	Q9P1W8	387 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CPSF2	Q9P2I0	782 aa	Known RBP	13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CPNE7	Q9UBL6	633 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PCDHGB2	Q9Y5G2	931 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	COLEC10	Q9Y6Z7	277 aa		13.58	□□□□□ -0.24
ATPAF2-208	ENST00000496852	UNC13C	Q8NB66	2214 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KRT87P	A6NCN2	255 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MYO1C	O00159	1063 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TRIM38	O00635	465 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MAP4	P27816	1152 aa	Known RBP	13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FASLG	P48023	281 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MAZ	P56270	477 aa	Known RBP	13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	AP1S2	P56377	157 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GUCY1A3	Q02108	690 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	NHLH1	Q02575	133 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	C14orf28	Q4W4Y0	310 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	PRR23C	Q6ZRP0	262 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	FRA10AC1	Q70Z53	315 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC9B2	Q86UD5	537 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	GPSM1	Q86YR5	675 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	ARL14	Q8N4G2	192 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	KY	Q8NBH2	561 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	RAD51AP1	Q96B01	352 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	CAMK1G	Q96NX5	476 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	HGH1	Q9BTY7	390 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	MENT	Q9BUN1	341 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	EDEM2	Q9BV94	578 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	TRIM54	Q9BYV2	358 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SLC40A1	Q9NP59	571 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	POLG2	Q9UHN1	485 aa		13.57	□□□□□ -0.24
ATPAF2-208	ENST00000496852	SYCE1L	A8MT33	242 aa		13.56	□□□□□ -0.24
ATPAF2-208	ENST00000496852		G3V2L1	256 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms