RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 BTBD10Q9BSF8 475 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 TUBB2BQ9BVA1 445 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 LAT2Q9GZY6 243 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 UBA5Q9GZZ9 404 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 WDR13Q9H1Z4 485 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 S1PR5Q9H228 398 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 CCDC68Q9H2F9 335 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 PDE7BQ9NP56 450 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 INTS9Q9NV88 658 aaKnown RBP3.37□□□□□ -1.87
CD46-218ENST00000496723 NSMCE4AQ9NXX6 385 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 MRPL15Q9P015 296 aaKnown RBP3.37□□□□□ -1.87
CD46-218ENST00000496723 CACNG5Q9UF02 275 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 TUBE1Q9UJT0 475 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 MTUS1Q9ULD2 1270 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 WBP11Q9Y2W2 641 aaKnown RBP3.37□□□□□ -1.87
CD46-218ENST00000496723 PYGO1Q9Y3Y4 419 aa3.37□□□□□ -1.87
CD46-218ENST00000496723 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 A0A1W2PN81 502 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 BEST1O76090 585 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 TPOP07202 933 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 FAM157CP0CG43 387 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 CA4P22748 312 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 DNASE1P24855 282 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 SLC6A6P31641 620 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 CHRNA7P36544 502 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 CDH13P55290 713 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 SP3Q02447 781 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 PRKCZQ05513 592 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ZNF772Q68DY9 489 aaPredicted RBP3.36□□□□□ -1.87
CD46-218ENST00000496723 BHLHB9Q6PI77 547 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ZNF497Q6ZNH5 498 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ARHGAP24Q8N264 748 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 MINDY1Q8N5J2 469 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 MAPKAPK5-AS1Q8N8E1 139 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 EXD1Q8NHP7 514 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 IRGQQ8WZA9 623 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ZNF622Q969S3 477 aaKnown RBP eCLIP3.36□□□□□ -1.87
CD46-218ENST00000496723 GMPPAQ96IJ6 420 aaPredicted RBP3.36□□□□□ -1.87
CD46-218ENST00000496723 MS4A10Q96PG2 267 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 MXD3Q9BW11 206 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ATAD3AQ9NVI7 634 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 ZDHHC2Q9UIJ5 367 aa3.36□□□□□ -1.87
CD46-218ENST00000496723 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 MEIOCA2RUB1 952 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 OR10H2O60403 315 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 AP2A2O94973 939 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 WDPCPO95876 746 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 RAF1P04049 648 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 OR2T7P0C7T2 308 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 CASP2P42575 452 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 NKX2-1P43699 371 aaPredicted RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 SLC9A3P48764 834 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 BMXP51813 675 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 B3GALT5-AS1P59052 145 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 SNRPD1P62314 119 aaKnown RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 IRX1P78414 480 aaPredicted RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 PRKG2Q13237 762 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 PHLDA2Q53GA4 152 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 ADAMTSL4-AS1Q5T5F5 129 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 RNASEH2BQ5TBB1 312 aaKnown RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 TMEM139Q8IV31 216 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 SCML4Q8N228 414 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 ZNF611Q8N823 705 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 TMEM178AQ8NBL3 297 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 MRGPRDQ8TDS7 321 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 HPSE2Q8WWQ2 592 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 PTERQ96BW5 349 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 ZNF653Q96CK0 615 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 TMCO6Q96DC7 493 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 NUP85Q9BW27 656 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 SLC35C2Q9NQQ7 365 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.35□□□□□ -1.87
CD46-218ENST00000496723 SDR39U1Q9NRG7 319 aaPredicted RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 ZNF701Q9NV72 531 aaPredicted RBP3.35□□□□□ -1.87
CD46-218ENST00000496723 B3GAT1Q9P2W7 334 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 RASAL2Q9UJF2 1139 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 NME7Q9Y5B8 376 aa3.35□□□□□ -1.87
CD46-218ENST00000496723 A0A087WW49 117 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 GLOD5A6NK44 160 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 SLCO1B7G3V0H7 640 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 MEIS2O14770 477 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 IPO8O15397 1037 aaKnown RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 RNASEH1O60930 286 aaKnown RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 CDC123O75794 336 aaPredicted RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 HOXC13P31276 330 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 MAGEA11P43364 429 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 NOVP48745 357 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 PPARDQ03181 441 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 BAATQ14032 418 aaPredicted RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 SNAPC1Q16533 368 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 PWWP2BQ6NUJ5 590 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 PIGZQ86VD9 579 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 DNAAF5Q86Y56 855 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 ZNF595Q8IYB9 648 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 NPEPL1Q8NDH3 523 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 OR2T11Q8NH01 316 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 OR4C3Q8NH37 302 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 CCDC107Q8WV48 283 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 SUSD6Q92537 303 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms