RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 SCAMP4Q969E2 229 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 DPY30Q9C005 99 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 ZFP14Q9HCL3 533 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 PCDH12Q9NPG4 1184 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 C1orf109Q9NX04 203 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 IL36AQ9UHA7 158 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 ANAPC2Q9UJX6 822 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
GARNL3-220ENST00000496711 MUC22E2RYF6 1773 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SAC3D1A6NKF1 404 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SOCS2O14508 198 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 TLL1O43897 1013 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 TPST1O60507 370 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 MTX2O75431 263 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 FTH1P02794 183 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CKMT2P17540 419 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 HRH2P25021 359 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PEX19P40855 299 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 AP1S2P56377 157 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 OR4D2P58180 307 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 MTPNP58546 118 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 FPGSQ05932 587 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 AAK1Q2M2I8 961 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ARSIQ5FYB1 569 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 DDHD1Q8NEL9 900 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 TRPV3Q8NET8 790 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ELMO1Q92556 727 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CENPNQ96H22 339 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ZSWIM3Q96MP5 696 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 MRPS26Q9BYN8 205 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 USP22Q9UPT9 525 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 NEUROG3Q9Y4Z2 214 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 KCNE1BA0A087WTH5 132 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 FAM149AA5PLN7 773 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 GFYI3L273 518 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 QSOX1O00391 747 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PDYNP01213 254 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 IL6P05231 212 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CTSLP07711 333 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PABPC4LP0CB38 370 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 TIMP2P16035 220 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CEBPBP17676 345 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ETV3P41162 512 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CCT8P50990 548 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 UBE3AQ05086 875 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SELPLGQ14242 412 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CPSF6Q16630 551 aaKnown RBP eCLIP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 FAM174BQ3ZCQ3 159 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 USP39Q53GS9 565 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 HENMT1Q5T8I9 393 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 Q6ZVL8 140 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CARM1Q86X55 608 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 EPHX4Q8IUS5 362 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PAPD5Q8NDF8 572 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 NUDT8Q8WV74 236 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SELENOMQ8WWX9 145 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ING5Q8WYH8 240 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 NSMCE2Q96MF7 247 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 C9orf16Q9BUW7 83 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ACPTQ9BZG2 426 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 ELOVL6Q9H5J4 265 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 CLMPQ9H6B4 373 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 RPF2Q9H7B2 306 aaKnown RBP12.74□□□□□ -0.37
GARNL3-220ENST00000496711 C8orf4Q9NR00 106 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 SNX6Q9UNH7 406 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
GARNL3-220ENST00000496711 PRRC2BQ5JSZ5 2229 aaKnown RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 FADS2P1A8MWK0 482 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 SGTAO43765 313 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 PGM3O95394 542 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ASLP04424 464 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 SRPRAP08240 638 aaKnown RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 SOX11P35716 441 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ATP6AP1Q15904 470 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF284Q2VY69 593 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 PTCHD3Q3KNS1 767 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ZNF805Q5CZA5 627 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 SUSD1Q6UWL2 747 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ISLR2Q6UXK2 745 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 RALGPS2Q86X27 583 aaPredicted RBP12.73□□□□□ -0.37
GARNL3-220ENST00000496711 TBC1D21Q8IYX1 336 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 CBR4Q8N4T8 237 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 MFSD2AQ8NA29 543 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 MCOLN3Q8TDD5 553 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 ASZ1Q8WWH4 475 aa12.73□□□□□ -0.37
GARNL3-220ENST00000496711 BADQ92934 168 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms