RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 LCN10Q6JVE6 187 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 TMEM220Q6QAJ8 160 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 FAM198BQ6UWH4 519 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 FAM151BQ6UXP7 276 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 OOSP2Q86WS3 158 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 ENDOVQ8N8Q3 282 aaKnown RBP8.55□□□□□ -1.04
SORT1-208ENST00000495777 FDCSPQ8NFU4 85 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 OR2L2Q8NH16 312 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 PNPLA2Q96AD5 504 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 MRGPRX2Q96LB1 330 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 LINC00615Q96LM1 132 aaPredicted RBP8.55□□□□□ -1.04
SORT1-208ENST00000495777 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
SORT1-208ENST00000495777 SMAD5Q99717 465 aaKnown RBP8.55□□□□□ -1.04
SORT1-208ENST00000495777 NUDT9Q9BW91 350 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 SYTL2Q9HCH5 934 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
SORT1-208ENST00000495777 UBP1Q9NZI7 540 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 POMT2Q9UKY4 750 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 TCFL5Q9UL49 500 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 ACSL5Q9ULC5 683 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 SNX7Q9UNH6 387 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 CENPEQ02224 2701 aa8.55□□□□□ -1.04
SORT1-208ENST00000495777 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 OR6C74A6NCV1 312 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 MGAT4DA6NG13 374 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 OR2AG2A6NM03 316 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 SGTAO43765 313 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 SEC31AO94979 1220 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 KLK3P07288 261 aaPredicted RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 APRTP07741 180 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PSMB4P28070 264 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 CDH17Q12864 832 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 MRPL49Q13405 166 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 SLC1A5Q15758 541 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 FNBP1LQ5T0N5 605 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 TMTC4Q5T4D3 741 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PRAMEF17Q5VTA0 474 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 DUPD1Q68J44 220 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 KCTD11Q693B1 232 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 DUS1LQ6P1R4 473 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 MED25Q71SY5 747 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 B4GALNT4Q76KP1 1039 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 GLT6D1Q7Z4J2 308 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 ZBTB2Q8N680 514 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 RBMXL3Q8N7X1 1067 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 MCUQ8NE86 351 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 CPT1BQ92523 772 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PEX13Q92968 403 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 LRRC39Q96DD0 335 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 RMDN2Q96LZ7 410 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 C12orf66Q96MD2 445 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PPM1MQ96MI6 270 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 NAT9Q9BTE0 207 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 LRRC1Q9BTT6 524 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PITPNM3Q9BZ71 974 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 WWP1Q9H0M0 922 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 ARNT2Q9HBZ2 717 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 C1GALT1Q9NS00 363 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 PCMTD2Q9NV79 361 aa8.54□□□□□ -1.04
SORT1-208ENST00000495777 MTRF1LQ9UGC7 380 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 CFAP20Q9Y6A4 193 aaKnown RBP8.54□□□□□ -1.04
SORT1-208ENST00000495777 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 MAGEB16A2A368 324 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 SLC9B1P1A6NJY1 282 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 AGAP14A8MT82 685 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 MATN2O00339 956 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 EIF3HO15372 352 aaKnown RBP eCLIP8.53□□□□□ -1.04
SORT1-208ENST00000495777 PRAMEF1O95521 474 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 METTL18O95568 372 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 LDLRP01130 860 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 SLC35G4P0C7Q5 338 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 MSH3P20585 1137 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 NDUFS1P28331 727 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 TNFRSF8P28908 595 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 PBLDP30039 288 aaPredicted RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 RRADP55042 308 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 CBLBQ13191 982 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 KCNJ11Q14654 390 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 NCF4Q15080 339 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 EIF2S3LQ2VIR3 472 aaKnown RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 DNAJC21Q5F1R6 531 aaKnown RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 TEX35Q5T0J7 233 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 RNASEH2BQ5TBB1 312 aaKnown RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 FAM69BQ5VUD6 431 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 ARMC6Q6NXE6 501 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 FBXO38Q6PIJ6 1188 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 NLRP9Q7RTR0 991 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 SYTL1Q8IYJ3 562 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 PDIK1LQ8N165 341 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 SLC25A41Q8N5S1 370 aa8.53□□□□□ -1.04
SORT1-208ENST00000495777 NOA1Q8NC60 698 aaKnown RBP8.53□□□□□ -1.04
SORT1-208ENST00000495777 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms