RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LACRTQ9GZZ8 138 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 FAM60AQ9NP50 221 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 AMFRQ9UKV5 643 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 PRSS21Q9Y6M0 314 aa22.46■■□□□ 1.19
COL27A1-208ENST00000494780 PIKFYVEQ9Y2I7 2098 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 GRID2IPA4D2P6 1211 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 MROH6A6NGR9 719 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 OR2B3O76000 313 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 MSNP26038 577 aaKnown RBP22.45■■□□□ 1.18
COL27A1-208ENST00000494780 VARSP26640 1264 aaKnown RBP22.45■■□□□ 1.18
COL27A1-208ENST00000494780 PLOD1Q02809 727 aaPredicted RBP22.45■■□□□ 1.18
COL27A1-208ENST00000494780 ELMO1Q92556 727 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 SGSM3Q96HU1 749 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 OR2A14Q96R47 310 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 SMAD5Q99717 465 aaKnown RBP22.45■■□□□ 1.18
COL27A1-208ENST00000494780 SLAMF7Q9NQ25 335 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 OR6C2Q9NZP2 312 aa22.45■■□□□ 1.18
COL27A1-208ENST00000494780 A6NL46 340 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 H3BMH7 237 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 KLF7O75840 302 aaPredicted RBP22.44■■□□□ 1.18
COL27A1-208ENST00000494780 CHRM5P08912 532 aaPredicted RBP22.44■■□□□ 1.18
COL27A1-208ENST00000494780 CD63P08962 238 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 GABRA4P48169 554 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 SPTBN1Q01082 2364 aaKnown RBP22.44■■□□□ 1.18
COL27A1-208ENST00000494780 SSPNQ14714 243 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 ZIC1Q15915 447 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 RHBDD2Q6NTF9 364 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 PEX26Q7Z412 305 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 LINC00523Q86TU6 105 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 TRIM73Q86UV7 250 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 UBL4BQ8N7F7 174 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 RBMXL3Q8N7X1 1067 aaKnown RBP22.44■■□□□ 1.18
COL27A1-208ENST00000494780 Q8NA96 180 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 OR5K2Q8NHB8 316 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 PNPLA2Q96AD5 504 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 PIH1D1Q9NWS0 290 aaKnown RBP22.44■■□□□ 1.18
COL27A1-208ENST00000494780 C5AR2Q9P296 337 aa22.44■■□□□ 1.18
COL27A1-208ENST00000494780 A0A0J9YY10 115 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SLC5A10A0PJK1 596 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 MIF4GDA9UHW6 222 aaKnown RBP22.43■■□□□ 1.18
COL27A1-208ENST00000494780 KDM1AO60341 852 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 OR56A5P0C7T3 313 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 CBSLP0DN79 551 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 OTX2P32243 289 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 FOXN2P32314 431 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 CBSP35520 551 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 GDF10P55107 478 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 KLF1Q13351 362 aaPredicted RBP22.43■■□□□ 1.18
COL27A1-208ENST00000494780 BRD3Q15059 726 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 MLIPQ5VWP3 458 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SLC6A19Q695T7 634 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 RAD9BQ6WBX8 426 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 MRGPREQ86SM8 312 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 FLVCR1-AS1Q8TAF5 88 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SLC35B2Q8TB61 432 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 PROKR1Q8TCW9 393 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 GBP5Q96PP8 586 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 TMEM121Q9BTD3 319 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 MFRPQ9BY79 579 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SPRTNQ9H040 489 aaPredicted RBP22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SPHK1Q9NYA1 384 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 GPN3Q9UHW5 284 aaPredicted RBP22.43■■□□□ 1.18
COL27A1-208ENST00000494780 TDRKHQ9Y2W6 561 aaKnown RBP22.43■■□□□ 1.18
COL27A1-208ENST00000494780 SHANK1Q9Y566 2161 aa22.43■■□□□ 1.18
COL27A1-208ENST00000494780 BHMG1C9JSJ3 638 aaPredicted RBP22.42■■□□□ 1.18
COL27A1-208ENST00000494780 IGHEP01854 428 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 TPBGLP0DKB5 382 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 DCDP81605 110 aaKnown RBP22.42■■□□□ 1.18
COL27A1-208ENST00000494780 SLC5A12Q1EHB4 618 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 DEFB110Q30KQ9 67 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 SYTL3Q4VX76 610 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 VWA5B1Q5TIE3 1220 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 LYPLAL1Q5VWZ2 237 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 SYCE1Q8N0S2 351 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 ACRBPQ8NEB7 543 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 MRFAP1L1Q96HT8 127 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 FER1L6-AS2Q96M78 137 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 SLC29A3Q9BZD2 475 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 SRPK3Q9UPE1 567 aa22.42■■□□□ 1.18
COL27A1-208ENST00000494780 R3HDM2Q9Y2K5 976 aaKnown RBP22.42■■□□□ 1.18
COL27A1-208ENST00000494780 CCDC78A2IDD5 438 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 CCDC162PA2VCL2 907 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 OR51F1A6NGY5 319 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 ERI2A8K979 691 aaKnown RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 F8W8V4 182 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 ZSCAN9O15535 394 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 HCRTR1O43613 425 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 FOLR3P41439 243 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 ZNF75DP51815 510 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 CDH17Q12864 832 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 KIR2DS3Q14952 304 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 C4orf17Q53FE4 359 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 PRR30Q53SZ7 412 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 C1orf189Q5VU69 101 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 TLDC1Q6P9B6 456 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 SSC4DQ8WTU2 575 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 TTC1Q99614 292 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 AP1M1Q9BXS5 423 aa22.41■■□□□ 1.18
COL27A1-208ENST00000494780 CUEDC1Q9NWM3 386 aaPredicted RBP22.41■■□□□ 1.18
COL27A1-208ENST00000494780 LUZP4Q9P127 313 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms