RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 AGAP14A8MT82 685 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 TRMUO75648 421 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 WDR47O94967 919 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 IL6P05231 212 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 HIST1H2AGP0C0S8 130 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 OR56A5P0C7T3 313 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 RAP2AP10114 183 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 BCKDHAP12694 445 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 HIST1H2ADP20671 130 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 BOP1Q14137 746 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 KCTD21Q4G0X4 260 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 C22orf39Q6P5X5 142 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ENPP6Q6UWR7 440 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ABRAXAS1Q6UWZ7 409 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 METTL3Q86U44 580 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 STK32CQ86UX6 486 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 TMEM25Q86YD3 366 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 TMC8Q8IU68 726 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CHST14Q8NCH0 376 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 TNIP2Q8NFZ5 429 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 UBTD2Q8WUN7 234 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 LYSMD1Q96S90 227 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ACPTQ9BZG2 426 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 BRD9Q9H8M2 597 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CARS2Q9HA77 564 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 PAK6Q9NQU5 681 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 C8orf4Q9NR00 106 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 SLC25A37Q9NYZ2 338 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 OGDHLQ9ULD0 1010 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CCL26Q9Y258 94 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 INVSQ9Y283 1065 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 PDE4DIPQ5VU43 2346 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 PIKFYVEQ9Y2I7 2098 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 KRT6AP02538 564 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 KRT6BP04259 564 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 C7P10643 843 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 EPORP19235 508 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 MTHFRP42898 656 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 YAP1P46937 504 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 KRT6CP48668 564 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ESRRGP62508 458 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ZXDCQ2QGD7 858 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 USP39Q53GS9 565 aaKnown RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CARD16Q5EG05 197 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 ASTLQ6HA08 431 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 GCNT7Q6ZNI0 430 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 GPR141Q7Z602 305 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 VRK3Q8IV63 474 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CLEC4FQ8N1N0 589 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CHCHD4Q8N4Q1 142 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 GLB1L3Q8NCI6 653 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-209ENST00000494623 SLC22A17Q8WUG5 538 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 USP7Q93009 1102 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 CD320Q9NPF0 282 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 FAM8A1Q9UBU6 413 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 B4GALT6Q9UBX8 382 aa10.95□□□□□ -0.66
CHMP3-209ENST00000494623 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 TULP3O75386 442 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 DEAF1O75398 565 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ALBP02768 609 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 GSNP06396 782 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 C8AP07357 584 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CBSLP0DN79 551 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CBSP35520 551 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CDK9P50750 372 aaKnown RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 IST1P53990 364 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PTPN5P54829 565 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PRMT2P55345 433 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PATL1Q86TB9 770 aaKnown RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CLVS1Q8IUQ0 354 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 MSRB3Q8IXL7 192 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 SLC22A15Q8IZD6 547 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 FAM162AQ96A26 154 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ECHDC3Q96DC8 303 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 YME1L1Q96TA2 773 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 C19orf43Q9BQ61 176 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 UGT2B28Q9BY64 529 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ELOVL6Q9H5J4 265 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CLMPQ9H6B4 373 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PARVBQ9HBI1 364 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 SLC6A13Q9NSD5 602 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ZNF639Q9UID6 485 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 UTS2RQ9UKP6 389 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 TMPRSS11EQ9UL52 423 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 DLGAP4Q9Y2H0 992 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 PCDHGA11Q9Y5H2 935 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 HEMK1Q9Y5R4 338 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 ELOVL7A1L3X0 281 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 NEDD8-MDP1E9PL57 170 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 UPK1AO00322 258 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 AREL1O15033 823 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CCL16O15467 120 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 LILRB3O75022 631 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 LRATO95237 230 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 POP4O95707 220 aaKnown RBP10.94□□□□□ -0.66
CHMP3-209ENST00000494623 C1SP09871 688 aa10.94□□□□□ -0.66
CHMP3-209ENST00000494623 CCL5P13501 91 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms