RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 WASH2PQ6VEQ5 465 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 TRIM48Q8IWZ4 208 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 MINDY1Q8N5J2 469 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 LMNTD1Q8N9Z9 388 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 OR5K2Q8NHB8 316 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 SLC37A2Q8TED4 501 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 DENND1AQ8TEH3 1009 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 WASH6PQ9NQA3 447 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 NCDNQ9UBB6 729 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 LNP1A1A4G5 178 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 SYCE1LA8MT33 242 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 TARM1B6A8C7 271 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 G3V2L1 256 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 SLC16A5O15375 505 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 HIST1H2AGP0C0S8 130 aaPredicted RBP18.86■□□□□ 0.61
USP39-218ENST00000493829 CPA3P15088 417 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 HIST1H2ADP20671 130 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 GYS2P54840 703 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 PFKFB4Q16877 469 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 IYDQ6PHW0 289 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 DCUN1D3Q8IWE4 304 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 MCOLN3Q8TDD5 553 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 PHF21BQ96EK2 531 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 HIST1H2AHQ96KK5 128 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 HIST1H2AJQ99878 128 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 H2AFJQ9BTM1 129 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 TRIM54Q9BYV2 358 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 NUDT4Q9NZJ9 180 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 GPR179Q6PRD1 2367 aa18.86■□□□□ 0.61
USP39-218ENST00000493829 POLR3GO15318 223 aaPredicted RBP18.85■□□□□ 0.61
USP39-218ENST00000493829 DLX3O60479 287 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 SMIM24O75264 130 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 RPN2P04844 631 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ENO2P09104 434 aaPredicted RBP18.85■□□□□ 0.61
USP39-218ENST00000493829 MTHFD2P13995 350 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 TAC1P20366 129 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 SLC19A1P41440 591 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 MAPK9P45984 424 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 SERPINB4P48594 390 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ZYG11AQ6WRX3 759 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 RASGRP3Q8IV61 690 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 C10orf107Q8IVU9 208 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 FBXO39Q8N4B4 442 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 PTGR2Q8N8N7 351 aaPredicted RBP18.85■□□□□ 0.61
USP39-218ENST00000493829 KYQ8NBH2 561 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 IL17FQ96PD4 163 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 PKP4Q99569 1192 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ANKRD12Q6UB98 2062 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 A8MT66 165 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ALDH3A1P30838 453 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 TTC23LQ6PF05 361 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ZNF761Q86XN6 746 aaPredicted RBP18.85■□□□□ 0.61
USP39-218ENST00000493829 TBC1D21Q8IYX1 336 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 RDH11Q8TC12 318 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 MAPK15Q8TD08 544 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 SAP25Q8TEE9 199 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 DYDC1Q8WWB3 177 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ESAMQ96AP7 390 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 XKR8Q9H6D3 395 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 ABCF3Q9NUQ8 709 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 INTS9Q9NV88 658 aaKnown RBP18.85■□□□□ 0.61
USP39-218ENST00000493829 FAM53CQ9NYF3 392 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 WWOXQ9NZC7 414 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 MID2Q9UJV3 735 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 HEBP2Q9Y5Z4 205 aa18.85■□□□□ 0.61
USP39-218ENST00000493829 RALGAPA1Q6GYQ0 2036 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 ARHGEF17Q96PE2 2063 aaPredicted RBP18.84■□□□□ 0.61
USP39-218ENST00000493829 LRRC14BA6NHZ5 514 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 VIPP01282 170 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 TPBGLP0DKB5 382 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 MYF5P13349 255 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 SLC2A4P14672 509 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 NBL1P41271 181 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 AGTR2P50052 363 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 SLC18A1P54219 525 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 TSTA3Q13630 321 aaPredicted RBP18.84■□□□□ 0.61
USP39-218ENST00000493829 KANSL1Q7Z3B3 1105 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 SFRP1Q8N474 314 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 C2orf73Q8N5S3 287 aaPredicted RBP18.84■□□□□ 0.61
USP39-218ENST00000493829 ARFGAP2Q8N6H7 521 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 PPFIBP2Q8ND30 876 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 MOCOSQ96EN8 888 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 IRF2BPLQ9H1B7 796 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 CNOT10Q9H9A5 744 aaKnown RBP18.84■□□□□ 0.61
USP39-218ENST00000493829 NCKIPSDQ9NZQ3 722 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 CPNE7Q9UBL6 633 aa18.84■□□□□ 0.61
USP39-218ENST00000493829 KIR2DS5A0A0G2JLQ3 304 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 A0A0G2JNG1 304 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 KIR2DS3K7RE56 304 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 YKT6O15498 198 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 NOBOXO60393 691 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 DFNA5O60443 496 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 SIX3O95343 332 aaPredicted RBP18.83■□□□□ 0.61
USP39-218ENST00000493829 SLC16A8O95907 504 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 LMNAP02545 664 aaKnown RBP18.83■□□□□ 0.61
USP39-218ENST00000493829 BPGMP07738 259 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 ANXA5P08758 320 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 DHRS4L1P0CG22 281 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 NEFHP12036 1026 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms