RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ZNF622Q969S3 477 aaKnown RBP eCLIP3.34□□□□□ -1.879e-8■■□□□ 12.4
PHC3-213ENST00000491258 APOPT1Q96IL0 206 aa3.34□□□□□ -1.87
PHC3-213ENST00000491258 RAB11FIP5Q9BXF6 653 aa3.34□□□□□ -1.87
PHC3-213ENST00000491258 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
PHC3-213ENST00000491258 CAMK2AQ9UQM7 478 aa3.34□□□□□ -1.87
PHC3-213ENST00000491258 CLIC4Q9Y696 253 aa3.34□□□□□ -1.87
PHC3-213ENST00000491258 ITSN1Q15811 1721 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 RGPD8O14715 1765 aaPredicted RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 BRWD3Q6RI45 1802 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 TEX13DA0A0J9YY54 714 aaPredicted RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 A0A1W2PQM1 296 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 ERVV-1B6SEH8 477 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 HNF4AP41235 474 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 OLIG2Q13516 323 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 P2RY6Q15077 328 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 TEAD2Q15562 447 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 CYP4A22Q5TCH4 519 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 TSSK4Q6SA08 328 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 IL27RAQ6UWB1 636 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 Q8N377 158 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 RASGEF1CQ8N431 466 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 RAB42Q8N4Z0 105 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 GCSAMQ8N6F7 178 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 HERVK_113Q902F9 699 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 GCC1Q96CN9 775 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 HERPUD2Q9BSE4 406 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 THUMPD2Q9BTF0 503 aaKnown RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 CLEC7AQ9BXN2 247 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 UPF3AQ9H1J1 476 aaKnown RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 PRKRIP1Q9H875 184 aaPredicted RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 INTS6Q9UL03 887 aaKnown RBP3.33□□□□□ -1.88
PHC3-213ENST00000491258 SARDHQ9UL12 918 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 MKLN1Q9UL63 735 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 SLC7A7Q9UM01 511 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 NIP7Q9Y221 180 aaKnown RBP eCLIP3.33□□□□□ -1.88
PHC3-213ENST00000491258 RREB1Q92766 1687 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 NUP188Q5SRE5 1749 aa3.33□□□□□ -1.88
PHC3-213ENST00000491258 PDE4DIPQ5VU43 2346 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 KANSL1LA0AUZ9 987 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 DNM1LO00429 736 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 JRKO75564 520 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 IGKV3-15P01624 115 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 HSPA1AP0DMV8 641 aaKnown RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 HSPA1BP0DMV9 641 aaKnown RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 UGT1A4P22310 534 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 CBLP22681 906 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 PRCPP42785 496 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 CDR2Q01850 454 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 GALNT2Q10471 571 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 OS9Q13438 667 aaPredicted RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 NECTIN1Q15223 517 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 RALBP1Q15311 655 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 CRY2Q49AN0 593 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 OLFM4Q6UX06 510 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 SLC38A9Q8NBW4 561 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 OR2T11Q8NH01 316 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 SUSD6Q92537 303 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 FAM122AQ96E09 287 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 SOSTQ9BQB4 213 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 PNNQ9H307 717 aaKnown RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 MAGIXQ9H6Y5 334 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 UBA2Q9UBT2 640 aaPredicted RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 EPHA6Q9UF33 1036 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 RARRES3Q9UL19 164 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 B3GALT5Q9Y2C3 310 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 CARMIL3Q8ND23 1372 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 FAM208AQ9UK61 1670 aaKnown RBP3.32□□□□□ -1.88
PHC3-213ENST00000491258 SHANK3Q9BYB0 1731 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 CASZ1Q86V15 1759 aa3.32□□□□□ -1.88
PHC3-213ENST00000491258 NHSQ6T4R5 1651 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 USP54Q70EL1 1684 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 MAP3K15Q6ZN16 1313 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 KLLNB2CW77 178 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 EIF3CLB5ME19 914 aaKnown RBP3.31□□□□□ -1.88
PHC3-213ENST00000491258 ATP2A1O14983 1001 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 NPHP1O15259 732 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 ZBTB43O43298 467 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 ICAM1P05362 532 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 ALDH1B1P30837 517 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 RIPK4P57078 832 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 GPR17Q13304 367 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 SLC10A5Q5PT55 438 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 SUSD4Q5VX71 490 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 PSRC1Q6PGN9 363 aaPredicted RBP3.31□□□□□ -1.88
PHC3-213ENST00000491258 Q6ZR54 194 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 CCDC190Q86UF4 302 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 CRYBG2Q8N1P7 616 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 TRIM63Q969Q1 353 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 NYXQ9GZU5 481 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 SLC25A18Q9H1K4 315 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 SEMA6AQ9H2E6 1030 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 OLFML3Q9NRN5 406 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 RNF186Q9NXI6 227 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 ABI3Q9P2A4 366 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 CAPN7Q9Y6W3 813 aa3.31□□□□□ -1.88
PHC3-213ENST00000491258 MYOM1P52179 1685 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms