RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ZBTB49Q6ZSB9 765 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 FOXP4Q8IVH2 680 aaPredicted RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 MFN1Q8IWA4 741 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 SLC4A11Q8NBS3 891 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 OR13J1Q8NGT2 312 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 FGFBP3Q8TAT2 258 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 CCDC107Q8WV48 283 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 SSMEM1Q8WWF3 244 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 DHX58Q96C10 678 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 NODALQ96S42 347 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 PSD2Q9BQI7 771 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 NAA11Q9BSU3 229 aaPredicted RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 SERINC1Q9NRX5 453 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 ECHDC1Q9NTX5 307 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 COQ3Q9NZJ6 369 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 CPSF3Q9UKF6 684 aaKnown RBP3.64□□□□□ -1.83
CD46-216ENST00000490278 MTUS1Q9ULD2 1270 aa3.64□□□□□ -1.83
CD46-216ENST00000490278 NEMP2A6NFY4 417 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 SLC22A3O75751 556 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 CAVIN2O95810 425 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 TSHBP01222 138 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 IGHV2-70P01814 119 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 PRSS1P07477 247 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 OR52Z1P0C646 297 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 EEF1B2P24534 225 aaKnown RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 ASCL1P50553 236 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 LIMK1P53667 647 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 MAPK12P53778 367 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 CDH11P55287 796 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 RBPJQ06330 500 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 ACSM1Q08AH1 577 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 DMPKQ09013 629 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 FAM133BQ5BKY9 247 aaKnown RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 ELFN2Q5R3F8 820 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 MFSD12Q6NUT3 480 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 BHLHA9Q7RTU4 235 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 SLFN11Q7Z7L1 901 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 DCUN1D3Q8IWE4 304 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 CAMKVQ8NCB2 501 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 NPEPL1Q8NDH3 523 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 OR1J1Q8NGS3 322 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 LRRC8CQ8TDW0 803 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 ROBO4Q8WZ75 1007 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 IRGQQ8WZA9 623 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 HSD17B8Q92506 261 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 TM9SF4Q92544 642 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 SYN2Q92777 582 aaPredicted RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 MOB3AQ96BX8 217 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 LRRC3BQ96PB8 259 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 SLC25A23Q9BV35 468 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 ST6GALNAC4Q9H4F1 302 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 BICC1Q9H694 974 aaKnown RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 Q9N2K0 584 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 MYNNQ9NPC7 610 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 ZNF701Q9NV72 531 aaPredicted RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.63□□□□□ -1.83
CD46-216ENST00000490278 LRWD1Q9UFC0 647 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 FLT1P17948 1338 aa3.63□□□□□ -1.83
CD46-216ENST00000490278 TSPY2A6NKD2 308 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 DUXAA6NLW8 204 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 RECQL5O94762 991 aaPredicted RBP3.62□□□□□ -1.83
CD46-216ENST00000490278 ATP5BP06576 529 aaKnown RBP3.62□□□□□ -1.83
CD46-216ENST00000490278 INHBAP08476 426 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 QDPRP09417 244 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 TSPY3P0CV98 308 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 TSPY8P0CW00 308 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 LIFP15018 202 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 MPZP25189 248 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 PTPN3P26045 913 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 TSPY1Q01534 308 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 LGALS3BPQ08380 585 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 ZC2HC1CQ53FD0 456 aaPredicted RBP3.62□□□□□ -1.83
CD46-216ENST00000490278 SYT14P1Q58G82 188 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 SFMBT2Q5VUG0 894 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 SLC35E4Q6ICL7 350 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 NUDT13Q86X67 352 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 DNAJC22Q8N4W6 341 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 STPG4Q8N801 248 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 Q8NFD4 153 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 KIF18AQ8NI77 898 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 GRHL3Q8TE85 626 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 FCAMRQ8WWV6 532 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 FER1L6-AS2Q96M78 137 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 ZNF558Q96NG5 402 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 MUS81Q96NY9 551 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 RHNO1Q9BSD3 238 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 S1PR5Q9H228 398 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 SDF2L1Q9HCN8 221 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 ZDHHC2Q9UIJ5 367 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 RNF150Q9ULK6 438 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 PCDH11YQ9BZA8 1340 aa3.62□□□□□ -1.83
CD46-216ENST00000490278 GREB1LQ9C091 1923 aaPredicted RBP3.62□□□□□ -1.83
CD46-216ENST00000490278 A0A1W2PN81 502 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 CLDN4O14493 209 aa3.61□□□□□ -1.83
CD46-216ENST00000490278 ZNF500O60304 480 aaPredicted RBP3.61□□□□□ -1.83
CD46-216ENST00000490278 CIDEAO60543 219 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms