RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TRAPPC5Q8IUR0 188 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CHCHD4Q8N4Q1 142 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PLA2G15Q8NCC3 412 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 OR14C36Q8NHC7 312 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ACTRT2Q8TDY3 377 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 SKA2Q8WVK7 121 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 PRR11Q96HE9 360 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 NSL1Q96IY1 281 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LOXL4Q96JB6 756 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 MRGPRX1Q96LB2 322 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 OR52B2Q96RD2 323 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 SEMA4BQ9NPR2 832 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 MRGBPQ9NV56 204 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 WWOXQ9NZC7 414 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LNPEPQ9UIQ6 1025 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 PDE10AQ9Y233 779 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 GPR89AB7ZAQ6 455 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 SDHDO14521 159 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LRP3O75074 770 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 MATN4O95460 622 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CBX6O95503 412 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 GUCA1CO95843 209 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PCCBP05166 539 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 JUNP05412 331 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 GPR89BP0CG08 455 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CALB2P22676 271 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 EPHA3P29320 983 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PIK3CGP48736 1102 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 RPIAP49247 311 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 HNMTP50135 292 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CDK3Q00526 305 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 SGCGQ13326 291 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 RBBP7Q16576 425 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LSM12Q3MHD2 195 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 UGT3A2Q3SY77 523 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 DGLUCYQ7Z3D6 616 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PACS2Q86VP3 889 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 HOMEZQ8IX15 550 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 SLC22A15Q8IZD6 547 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CEP70Q8NHQ1 597 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ASB12Q8WXK4 309 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 PTCD3Q96EY7 689 aaKnown RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 CD244Q9BZW8 370 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 WDR55Q9H6Y2 383 aaPredicted RBP12.42□□□□□ -0.42
NELFE-209ENST00000488426 ARL8BQ9NVJ2 186 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 ARMCX1Q9P291 453 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
NELFE-209ENST00000488426 GOLGA8QA0A0J9YX86 632 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GOLGA8OA6NCC3 632 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 TMEM202A6NGA9 273 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 E9PBE3 544 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GOLGA8NF8WBI6 632 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 SLC22A2O15244 555 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 TAPBPO15533 448 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 KLHL41O60662 606 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 RNGTTO60942 597 aaKnown RBP12.41□□□□□ -0.42
NELFE-209ENST00000488426 PSIP1O75475 530 aaKnown RBP12.41□□□□□ -0.42
NELFE-209ENST00000488426 SKAP2O75563 359 aaPredicted RBP12.41□□□□□ -0.42
NELFE-209ENST00000488426 ACADMP11310 421 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 NCF2P19878 526 aaPredicted RBP12.41□□□□□ -0.42
NELFE-209ENST00000488426 GGT5P36269 586 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 TRIM23P36406 574 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GTF2H2Q13888 395 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 IRF4Q15306 451 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 FBXO48Q5FWF7 155 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 CLEC6AQ6EIG7 209 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GTF2H2CQ6P1K8 395 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GPRIN3Q6ZVF9 776 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 ASRGL1Q7L266 308 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 GOLGA7Q7Z5G4 137 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 HORMAD1Q86X24 394 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
NELFE-209ENST00000488426 HM13Q8TCT9 377 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 MCOLN3Q8TDD5 553 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 KLHL29Q96CT2 875 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 TMEM79Q9BSE2 394 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 LRMDAQ9H2I8 198 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 PFDN4Q9NQP4 134 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 FSCN3Q9NQT6 498 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 OPTCQ9UBM4 332 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 CYP8B1Q9UNU6 501 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 ASB1Q9Y576 335 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
NELFE-209ENST00000488426 CEP192Q8TEP8 1941 aa12.4□□□□□ -0.42
NELFE-209ENST00000488426 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
NELFE-209ENST00000488426 A0A1W2PQU0 124 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms