RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PRICKLE1Q96MT3 831 aaPredicted RBP3.42□□□□□ -1.86
SMC4-219ENST00000487747 AMACRQ9UHK6 382 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 MUTYHQ9UIF7 546 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 ZHX1Q9UKY1 873 aaPredicted RBP3.42□□□□□ -1.86
SMC4-219ENST00000487747 RARRES3Q9UL19 164 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 PPP2R2CQ9Y2T4 447 aa3.42□□□□□ -1.86
SMC4-219ENST00000487747 HYKKA2RU49 373 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 C15orf61A6NNL5 157 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 HEPACAM2A8MVW5 462 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 CDH2P19022 906 aaPredicted RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 CDC25CP30307 473 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 PTGER3P43115 390 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 HUNKP57058 714 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 ITPRIPL2Q3MIP1 535 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 TMTC3Q6ZXV5 915 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 OR5M8Q8NGP6 311 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 OR2AJ1Q8NGZ0 328 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 VANGL1Q8TAA9 524 aaPredicted RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 IRGQQ8WZA9 623 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 ZNF486Q96H40 463 aaPredicted RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 OR6C1Q96RD1 312 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 SEC62Q99442 399 aaKnown RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 SHARPINQ9H0F6 387 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 MUC13Q9H3R2 512 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 KAT14Q9H8E8 782 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 C9orf78Q9NZ63 289 aaPredicted RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 TUBE1Q9UJT0 475 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 EXO1Q9UQ84 846 aaKnown RBP3.41□□□□□ -1.86
SMC4-219ENST00000487747 HCFC1P51610 2035 aa3.41□□□□□ -1.86
SMC4-219ENST00000487747 MPTX1A8MV57 137 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 SSX4O60224 188 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 RNASEH2AO75792 299 aaKnown RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 TMEM63AO94886 807 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 IGHV4-31P0DP07 118 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 PPARGP37231 505 aaPredicted RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 FASTKD3Q14CZ7 662 aaKnown RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 ZRSR2Q15696 482 aaKnown RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 SARM1Q6SZW1 724 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 EID3Q8N140 333 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 NIPA2Q8N8Q9 360 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 PCYOX1LQ8NBM8 494 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 IL17REQ8NFR9 667 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 TDRD7Q8NHU6 1098 aaKnown RBP3.4□□□□□ -1.87
SMC4-219ENST00000487747 ZPLD1Q8TCW7 415 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 NCAPGQ9BPX3 1015 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 NUP85Q9BW27 656 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 SH2D4AQ9H788 454 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 GPR83Q9NYM4 423 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 CACNG4Q9UBN1 327 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 SESN1Q9Y6P5 492 aa3.4□□□□□ -1.87
SMC4-219ENST00000487747 A0A1W2PR80 420 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 BCL2L11O43521 198 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 CREG1O75629 220 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 DDHD2O94830 711 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 MMP9P14780 707 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 PSMA4P25789 261 aaKnown RBP3.39□□□□□ -1.87
SMC4-219ENST00000487747 TPD52P55327 224 aaPredicted RBP3.39□□□□□ -1.87
SMC4-219ENST00000487747 G3BP1Q13283 466 aaKnown RBP eCLIP3.39□□□□□ -1.871e-39■■■■■ 140
SMC4-219ENST00000487747 SLC25A47Q6Q0C1 308 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 TMEM207Q6UWW9 146 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SMC4-219ENST00000487747 INTS8Q75QN2 995 aaKnown RBP3.39□□□□□ -1.87
SMC4-219ENST00000487747 CEP57L1Q8IYX8 460 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 SLC39A11Q8N1S5 342 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 WDTC1Q8N5D0 677 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 AQP11Q8NBQ7 271 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 C17orf47Q8NEP4 570 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 TBATAQ96M53 351 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 NECTIN4Q96NY8 510 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 DPAGT1Q9H3H5 408 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 MAN2C1Q9NTJ4 1040 aa3.39□□□□□ -1.87
SMC4-219ENST00000487747 XRCC3O43542 346 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 DDX58O95786 925 aaKnown RBP3.38□□□□□ -1.87
SMC4-219ENST00000487747 WDPCPO95876 746 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 TBX18O95935 607 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 DUX4L4P0CJ87 422 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 PRG2P13727 222 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 ITIH1P19827 911 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 PRKACGP22612 351 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 PDX1P52945 283 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 HERV-K104P61576 105 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 TRA2BP62995 288 aaKnown RBP3.38□□□□□ -1.87
SMC4-219ENST00000487747 GCNT1Q02742 428 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 KCNC3Q14003 757 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 MOGAT2Q3SYC2 334 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 SPDYCQ5MJ68 293 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 IKBIPQ70UQ0 350 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 RTN4RL2Q86UN3 420 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 TICAM1Q8IUC6 712 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 TEX11Q8IYF3 940 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 ARHGAP24Q8N264 748 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 POM121L12Q8N7R1 296 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 OR11H4Q8NGC9 324 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 PHLDA1Q8WV24 401 aaPredicted RBP3.38□□□□□ -1.87
SMC4-219ENST00000487747 POMGNT1Q8WZA1 660 aa3.38□□□□□ -1.87
SMC4-219ENST00000487747 MOAP1Q96BY2 351 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms