RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ISM1B1AKI9 464 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 H3BN98 237 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 QSOX1O00391 747 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 MAN1A2O60476 641 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 FAM189BP81408 668 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 MEF2AQ02078 507 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 CLEC14AQ86T13 490 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 OR4A15Q8NGL6 344 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 RHEBL1Q8TAI7 183 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 MEAF6Q9HAF1 191 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 CLK4Q9HAZ1 481 aaKnown RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 TMEM98Q9Y2Y6 226 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 DIRAS1O95057 198 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 MAPK9P45984 424 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 RPS9P46781 194 aaKnown RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 CYP4F3Q08477 520 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 HID1Q8IV36 788 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SLC30A3Q99726 388 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 PAIP1Q9H074 479 aaKnown RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 ERVPABLB-1P60509 514 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 HKDC1Q2TB90 917 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 PDSS2Q86YH6 399 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 APLFQ8IW19 511 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-216ENST00000486741 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 PPCDCQ96CD2 204 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 PLEKHG4BQ96PX9 1271 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SYNDIG1Q9H7V2 258 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 SPHK2Q9NRA0 654 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 RAD18Q9NS91 495 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 TPD52L2O43399 206 aaKnown RBP12.94□□□□□ -0.34
HMGN1-216ENST00000486741 SGTAO43765 313 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 ADH5P11766 374 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 DNAJB1P25685 340 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 GPM6BQ13491 265 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 RFLNAQ6ZTI6 216 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 SLC15A3Q8IY34 581 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 RGL4Q8IZJ4 473 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 CD200R1Q8TD46 325 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 DACT3Q96B18 629 aaPredicted RBP12.94□□□□□ -0.34
HMGN1-216ENST00000486741 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 ADI1Q9BV57 179 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 FBXO10Q9UK96 956 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 ITM2BQ9Y287 266 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 DGKBQ9Y6T7 804 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 C8GP07360 202 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 DDX5P17844 614 aaKnown RBP12.94□□□□□ -0.34
HMGN1-216ENST00000486741 CAPN3P20807 821 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
HMGN1-216ENST00000486741 C17orf64Q86WR6 236 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 KRT78Q8N1N4 520 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 NSMCE3Q96MG7 304 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 CD244Q9BZW8 370 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 FARSBQ9NSD9 589 aaKnown RBP12.94□□□□□ -0.34
HMGN1-216ENST00000486741 CXCR6O00574 342 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 SERPINA1P01009 418 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 SRCP12931 536 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 TTC23Q5W5X9 447 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 NANOGP8Q6NSW7 305 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 LETMD1Q6P1Q0 360 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 CNTN4Q8IWV2 1026 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 NANOGQ9H9S0 305 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 C3orf18Q9UK00 162 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 RAB26Q9ULW5 256 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
HMGN1-216ENST00000486741 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 MANBAO00462 879 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 STX16O14662 325 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 TSPAN6O43657 245 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 DFNA5O60443 496 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PRKD3O94806 890 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PGRP06401 933 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 NRIP1P48552 1158 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 SLC16A1P53985 500 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 GRM2Q14416 872 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 MANEALQ5VSG8 457 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 FRG2Q64ET8 278 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 CRTC1Q6UUV9 634 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 BHLHA9Q7RTU4 235 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 OR10G6Q8NH81 332 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PEX13Q92968 403 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms