RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 MSL3P1P0C860 447 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 FGF3P11487 239 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 MTHFD1P11586 935 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 CCL4P13236 92 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 VCLP18206 1134 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CD9P21926 228 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 MGAT1P26572 445 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 AOAHP28039 575 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GABRB3P28472 473 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 TSPAN7P41732 249 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 ABCG1P45844 678 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 PREPP48147 710 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GNG11P61952 73 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 YBX1P67809 324 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 GPS1Q13098 491 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 BOP1Q14137 746 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 GPR18Q14330 331 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 FRG1Q14331 258 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 ST3GAL2Q16842 350 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 INSCQ1MX18 579 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 ZXDCQ2QGD7 858 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 CCSMST1Q4G0I0 132 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 FNBP1LQ5T0N5 605 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 HIBCHQ6NVY1 386 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 ZNF549Q6P9A3 640 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 FBXO38Q6PIJ6 1188 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 AFTPHQ6ULP2 937 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 SYDE1Q6ZW31 735 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 CENPUQ71F23 418 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 RAB11FIP2Q7L804 512 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 PRSS42Q7Z5A4 293 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GALNT7Q86SF2 657 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 TRAPPC5Q8IUR0 188 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CNTN4Q8IWV2 1026 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 PPIL6Q8IXY8 311 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 SLC22A15Q8IZD6 547 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CARFQ8N187 725 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 Q8N9G6 341 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 DNAAF3Q8N9W5 541 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GRK7Q8WTQ7 553 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 ZCCHC14Q8WYQ9 949 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 SEC14L1Q92503 715 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 SLC41A2Q96JW4 573 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 NAPGQ99747 312 aaPredicted RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 DPH1Q9BZG8 443 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 TFB2MQ9H5Q4 396 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 KIR3DX1Q9H7L2 352 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 COG4Q9H9E3 785 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 EPB41L5Q9HCM4 733 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 APMAPQ9HDC9 416 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 FBXO8Q9NRD0 319 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 GRHL1Q9NZI5 618 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 SLC24A2Q9UI40 661 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CRLS1Q9UJA2 301 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 SATB2Q9UPW6 733 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 DNAJC16Q9Y2G8 782 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CFAP20Q9Y6A4 193 aaKnown RBP5.57□□□□□ -1.52
CUX1-208ENST00000485792 FAM169AQ9Y6X4 670 aa5.57□□□□□ -1.52
CUX1-208ENST00000485792 CTAGE9A4FU28 777 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SDR42E2A6NKP2 422 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ADARB2-AS1A8MUL3 147 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 E7EVH7 732 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 H3BMH7 237 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PRMT5O14744 637 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 CD3EAPO15446 510 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 PRICKLE3O43900 615 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 SEC31AO94979 1220 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 MATN4O95460 622 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 GAS8O95995 478 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 VIPP01282 170 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 RALBP11234 206 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 EPXP11678 715 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 OGNP20774 298 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 NDUFS1P28331 727 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ALDH4A1P30038 563 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PBLDP30039 288 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 ECHS1P30084 290 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CCR7P32248 378 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CAPZBP47756 277 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TTPAP49638 278 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 FOXL2P58012 376 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 GABREP78334 506 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 BASP1P80723 227 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 MC2RQ01718 297 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PLOD1Q02809 727 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 C2orf54Q08AI8 447 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 GTF2H3Q13889 308 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SEPT6Q14141 434 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 DHX34Q14147 1143 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 MORF4L2Q15014 288 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TGIF1Q15583 401 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ANKRD20A4Q4UJ75 823 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ZRANB3Q5FWF4 1079 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 C3orf38Q5JPI3 329 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 STEAP4Q687X5 459 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TRMT10BQ6PF06 316 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 ZDHHC24Q6UX98 284 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PPP1R21Q6ZMI0 780 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms