RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TRIM48Q8IWZ4 208 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 DSELQ8IZU8 1212 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 WDTC1Q8N5D0 677 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 LINC00301Q8NCQ3 95 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 CATSPER1Q8NEC5 780 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF397Q8NF99 534 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-210ENST00000485247 SHC3Q92529 594 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 NR4A3Q92570 626 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 NT5C3BQ969T7 300 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 CLIP3Q96DZ5 547 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 PGAP3Q96FM1 320 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-210ENST00000485247 DTD2Q96FN9 168 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 PAGE5Q96GU1 130 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 SLC41A2Q96JW4 573 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 TUBGCP5Q96RT8 1024 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 AARSD1Q9BTE6 412 aaKnown RBP5.19□□□□□ -1.58
PTPN4-210ENST00000485247 MAGEB5Q9BZ81 275 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 ENKD1Q9H0I2 346 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 SYNCQ9H7C4 482 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 ATP13A3Q9H7F0 1226 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 KCND1Q9NSA2 647 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 TMEM248Q9NWD8 314 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 DTLQ9NZJ0 730 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 UBA2Q9UBT2 640 aaPredicted RBP5.19□□□□□ -1.58
PTPN4-210ENST00000485247 B4GALT6Q9UBX8 382 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 OR12D3Q9UGF7 316 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 CD84Q9UIB8 345 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 ABCA4P78363 2273 aa5.19□□□□□ -1.58
PTPN4-210ENST00000485247 COL6A5A8TX70 2615 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FN1P02751 2386 aaKnown RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TRIM49BA6NDI0 452 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 OR5K4A6NMS3 321 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FAM72CH0Y354 149 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 CUTAO60888 179 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 DNAJC6O75061 913 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ALOX12BO75342 701 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 KLF7O75840 302 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 STK10O94804 968 aaKnown RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 HEXIM1O94992 359 aaKnown RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 VIPP01282 170 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 JCHAINP01591 159 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ATP1A1P05023 1023 aaKnown RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TNFAIP3P21580 790 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 LHCGRP22888 699 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TEAD1P28347 426 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 PCSK6P29122 969 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ADRA1BP35368 520 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 RORAP35398 523 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FMO5P49326 533 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 CASP6P55212 293 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TUBB4BP68371 445 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FOLH1Q04609 750 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 BCL2L1Q07817 233 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TUBB2AQ13885 445 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 NCF4Q15080 339 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 PTPRRQ15256 657 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 MEA1Q16626 185 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SLC25A52Q3SY17 297 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ZCWPW2Q504Y3 356 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FAM72AQ5TYM5 149 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FAM72DQ6L9T8 149 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 NCCRP1Q6ZVX7 275 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SRLQ86TD4 932 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 FAM72BQ86X60 149 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 PHYKPLQ8IUZ5 450 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SYTL1Q8IYJ3 562 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 AVL9Q8NBF6 648 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ACBD4Q8NC06 268 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 C1orf131Q8NDD1 294 aaKnown RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 OR1N1Q8NGS0 311 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ADAMTS18Q8TE60 1221 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 COG1Q8WTW3 980 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 CPT1BQ92523 772 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SCAMP4Q969E2 229 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SLC35C1Q96A29 364 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 AP2M1Q96CW1 435 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF501Q96CX3 271 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ECHDC3Q96DC8 303 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 LRFN5Q96NI6 719 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 IP6K3Q96PC2 410 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TAAR6Q96RI8 345 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 AGAP2Q99490 1192 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 MAP3K3Q99759 626 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TUBB2BQ9BVA1 445 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 JAM3Q9BX67 310 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 LIME1Q9H400 295 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 OSGEPL1Q9H4B0 414 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 UCK1Q9HA47 277 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 P4HTMQ9NXG6 502 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 KCTD5Q9NXV2 234 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF624Q9P2J8 865 aaPredicted RBP5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SEC14L3Q9UDX4 400 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 TINAGQ9UJW2 476 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 PADI2Q9Y2J8 665 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 SIK3Q9Y2K2 1263 aa5.18□□□□□ -1.58
PTPN4-210ENST00000485247 STAB1Q9NY15 2570 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 MAP1AP78559 2803 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 FBN1P35555 2871 aaKnown RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 NPIPB15A6NHN6 443 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 C9J4A7 227 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms