RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CBSLP0DN79 551 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 ITGALP20701 1170 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 COL8A1P27658 744 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 CBSP35520 551 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 ZNF140P52738 457 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-227ENST00000485102 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
HDAC6-227ENST00000485102 DENND5AQ6IQ26 1287 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 ZNF449Q6P9G9 518 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 PPP1R2P1Q96PQ5 205 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 FICDQ9BVA6 458 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 FAM60AQ9NP50 221 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 SPTLC3Q9NUV7 552 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 FAM8A1Q9UBU6 413 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 EFR3BQ9Y2G0 817 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 PCDHGA10Q9Y5H3 936 aa12.58□□□□□ -0.4
HDAC6-227ENST00000485102 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.4
HDAC6-227ENST00000485102 F5H423 210 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-227ENST00000485102 OR2B3O76000 313 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 TNNT1P13805 278 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 PVRP15151 417 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 RBL1P28749 1068 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 PDHA2P29803 388 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 OTX2P32243 289 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 FOLR3P41439 243 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 MLIPQ5VWP3 458 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 TLDC1Q6P9B6 456 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 IGFL2Q6UWQ7 119 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 C19orf47Q8N9M1 422 aaKnown RBP12.57□□□□□ -0.4
HDAC6-227ENST00000485102 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 OR13C4Q8NGS5 318 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 FLVCR1-AS1Q8TAF5 88 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 COG1Q8WTW3 980 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 OR2A14Q96R47 310 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 FERMT1Q9BQL6 677 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 TSGA10Q9BZW7 698 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 ENAMQ9NRM1 1142 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 MAP10Q9P2G4 905 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
HDAC6-227ENST00000485102 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-227ENST00000485102 CSMD1Q96PZ7 3565 aa12.57□□□□□ -0.4
HDAC6-227ENST00000485102 LDB2O43679 373 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 AP2A2O94973 939 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 PSMA3P25788 255 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ACRV1P26436 265 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ACADLP28330 430 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 SHMT2P34897 504 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 GCGRP47871 477 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 COPS2P61201 443 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 RAPSNQ13702 412 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ELOAQ14241 798 aaKnown RBP12.56□□□□□ -0.4
HDAC6-227ENST00000485102 PRPSAP1Q14558 356 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 LLGL1Q15334 1064 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ZIC1Q15915 447 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 KYNUQ16719 465 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ANKRD20A2Q5SQ80 823 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ANKRD20A1Q5TYW2 823 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ANKRD20A3Q5VUR7 823 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 UNC5AQ6ZN44 842 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 PPP1R32Q7Z5V6 425 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 TBC1D21Q8IYX1 336 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 NRTNQ99748 197 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 SPRTNQ9H040 489 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ILKAPQ9H0C8 392 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-227ENST00000485102 AGPAT4Q9NRZ5 378 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 IFT80Q9P2H3 777 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-227ENST00000485102 POLG2Q9UHN1 485 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 GPN3Q9UHW5 284 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-227ENST00000485102 ICKQ9UPZ9 632 aa12.56□□□□□ -0.4
HDAC6-227ENST00000485102 AGPSO00116 658 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 QSOX1O00391 747 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 HCRTR1O43613 425 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 CNOT3O75175 753 aaKnown RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 ZNF189O75820 626 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 ALBP02768 609 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 UMODP07911 640 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 UGT2B7P16662 529 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 MAGEA1P43355 309 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 PLOD1Q02809 727 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 AIMP2Q13155 320 aaKnown RBP12.55□□□□□ -0.4
HDAC6-227ENST00000485102 PRKG2Q13237 762 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 SLC5A12Q1EHB4 618 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 NKAIN1Q4KMZ8 207 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 CUZD1Q86UP6 607 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 SERPINA9Q86WD7 417 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 LRRC8AQ8IWT6 810 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 DNAJC22Q8N4W6 341 aa12.55□□□□□ -0.4
HDAC6-227ENST00000485102 DENND1AQ8TEH3 1009 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms