RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 HGFP14210 728 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 LBPP18428 481 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 PREPP48147 710 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 RCN1Q15293 331 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 IRF4Q15306 451 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 MAPRE2Q15555 327 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 C11orf96Q7Z7L8 435 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 OXR1Q8N573 874 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 CDYL2Q8N8U2 506 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 RPLP0P6Q8NHW5 317 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 STX18Q9P2W9 335 aaKnown RBP25.6■■□□□ 1.69
SHOX2-204ENST00000483851 SHISA7A6NL88 538 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ARHGEF33A8MVX0 844 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 PAK4O96013 591 aaPredicted RBP25.6■■□□□ 1.69
SHOX2-204ENST00000483851 GDF5P43026 501 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ACADVLP49748 655 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ACTR3P61158 418 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ABRQ12979 859 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 FGL2Q14314 439 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 ZRSR2Q15696 482 aaKnown RBP25.6■■□□□ 1.69
SHOX2-204ENST00000483851 CMPK2Q5EBM0 449 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 PGM2L1Q6PCE3 622 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 MBOAT1Q6ZNC8 495 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 SPATA19Q7Z5L4 167 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 LRRTM4Q86VH4 590 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 TUBGCP3Q96CW5 907 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 MRGPRX1Q96LB2 322 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 POLG2Q9UHN1 485 aa25.6■■□□□ 1.69
SHOX2-204ENST00000483851 CAPN1P07384 714 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 ACADMP11310 421 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 PBLDP30039 288 aaPredicted RBP25.59■■□□□ 1.69
SHOX2-204ENST00000483851 MRPL19P49406 292 aaKnown RBP25.59■■□□□ 1.69
SHOX2-204ENST00000483851 SLC25A3Q00325 362 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 CYLC2Q14093 348 aaPredicted RBP25.59■■□□□ 1.69
SHOX2-204ENST00000483851 INPP5AQ14642 412 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 CCDC85BQ15834 202 aaPredicted RBP25.59■■□□□ 1.69
SHOX2-204ENST00000483851 LEXMQ3ZCV2 418 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 SLC29A3Q9BZD2 475 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 RMI1Q9H9A7 625 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 MBNL1Q9NR56 388 aaKnown RBP25.59■■□□□ 1.69
SHOX2-204ENST00000483851 STOML1Q9UBI4 398 aa25.59■■□□□ 1.69
SHOX2-204ENST00000483851 MYO10Q9HD67 2058 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 ATP6AP2A0A1C7CYW4 349 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 NARSO43776 548 aaKnown RBP25.58■■□□□ 1.69
SHOX2-204ENST00000483851 ATP6AP2O75787 350 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 LINC00032P0C843 101 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 HMOX2P30519 316 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 ARL1P40616 181 aaPredicted RBP25.58■■□□□ 1.69
SHOX2-204ENST00000483851 STX1BP61266 288 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 MXRA7P84157 204 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 GRIK2Q13002 908 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 GSTA3Q16772 222 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 GGTA1PQ4G0N0 100 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 IER5LQ5T953 404 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 AMZ2Q86W34 360 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 LILRA3Q8N6C8 439 aaPredicted RBP25.58■■□□□ 1.69
SHOX2-204ENST00000483851 FAM8A1Q9UBU6 413 aa25.58■■□□□ 1.69
SHOX2-204ENST00000483851 MYCLP1P12525 358 aaPredicted RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 PDHA2P29803 388 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 PTK2BQ14289 1009 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 PTCHD3Q3KNS1 767 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 RIPOR1Q6ZS17 1223 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 MYLK4Q86YV6 388 aaPredicted RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 CDK15Q96Q40 435 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 SLC6A17Q9H1V8 727 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 DNAJC11Q9NVH1 559 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 G3BP2Q9UN86 482 aaKnown RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 BTRCQ9Y297 605 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TMEM98Q9Y2Y6 226 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 ZFC3H1O60293 1989 aaKnown RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3DA0A087WVF3 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3IA0A087WXS9 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3EA0A087X179 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3KA0A087X1G2 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 LOC100653049A0A140TA62 436 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3FA6NER0 549 aaPredicted RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3LB9A6J9 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 KMOO15229 486 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 KRT34O76011 436 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 CLDN9O95484 217 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 RPSAP08865 295 aaKnown RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3HP0C7X1 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 SLC34A1Q06495 639 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3GQ6DHY5 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3CQ6IPX1 549 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 XKR5Q6UX68 686 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 UNC5DQ6UXZ4 953 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 TBC1D3Q8IZP1 549 aaPredicted RBP25.57■■□□□ 1.68
SHOX2-204ENST00000483851 LGR4Q9BXB1 951 aa25.57■■□□□ 1.68
SHOX2-204ENST00000483851 PSMD12O00232 456 aaPredicted RBP25.56■■□□□ 1.68
SHOX2-204ENST00000483851 CIB2O75838 187 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 ITGAXP20702 1163 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 ZXDCQ2QGD7 858 aaPredicted RBP25.56■■□□□ 1.68
SHOX2-204ENST00000483851 CRTC3Q6UUV7 619 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 DENND6BQ8NEG7 585 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 NRG4Q8WWG1 115 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 RSRC1Q96IZ7 334 aaKnown RBP25.56■■□□□ 1.68
SHOX2-204ENST00000483851 TMEM45AQ9NWC5 275 aa25.56■■□□□ 1.68
SHOX2-204ENST00000483851 UGDHO60701 494 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms