RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.57
HMGN1-213ENST00000482192 PCYOX1Q9UHG3 505 aa11.52□□□□□ -0.57
HMGN1-213ENST00000482192 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.57
HMGN1-213ENST00000482192 SCRG1O75711 98 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TIAF1O95411 115 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 CHRM5P08912 532 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TPBGLP0DKB5 382 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 DLSTP36957 453 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 RAB28P51157 221 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 MC1RQ01726 317 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 PTK6Q13882 451 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 ANKRD20A4Q4UJ75 823 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 CTSL3PQ5NE16 218 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 RNASEH2BQ5TBB1 312 aaKnown RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 ZNF470Q6ECI4 717 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 NEPROQ6NW34 567 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 SPESP1Q6UW49 350 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 PCGF5Q86SE9 256 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TMEM135Q86UB9 458 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TMEM126BQ8IUX1 230 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 DCUN1D3Q8IWE4 304 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 CAPZA3Q96KX2 299 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 BIRC8Q96P09 236 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TRAPPC9Q96Q05 1148 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 NAPGQ99747 312 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 ARHGAP9Q9BRR9 750 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 TRIM56Q9BRZ2 755 aaKnown RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 LATS2Q9NRM7 1088 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 INTS10Q9NVR2 710 aaKnown RBP11.51□□□□□ -0.57
HMGN1-213ENST00000482192 PADI1Q9ULC6 663 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 PYCARDQ9ULZ3 195 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 MRFAP1Q9Y605 127 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 SAR1BQ9Y6B6 198 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 MAD1L1Q9Y6D9 718 aa11.51□□□□□ -0.57
HMGN1-213ENST00000482192 ZCWPW2A0A1B0GU75 182 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CTAGE9A4FU28 777 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CPNE3O75131 537 aaKnown RBP11.5□□□□□ -0.57
HMGN1-213ENST00000482192 USP1O94782 785 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 PRB1P04280 392 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 ST6GAL1P15907 406 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 UGT2B7P16662 529 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 PKLRP30613 574 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 FMO4P31512 558 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 C19orf57Q0VDD7 668 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 ABRQ12979 859 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 LY6DQ14210 128 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 KIR2DS3Q14952 304 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 KYNUQ16719 465 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 PLEKHS1Q5SXH7 462 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 TTC23LQ6PF05 361 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CENPUQ71F23 418 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CREG2Q8IUH2 290 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 LMNTD2Q8IXW0 634 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CFAP61Q8NHU2 1237 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-213ENST00000482192 STARD8Q92502 1023 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 EXTL1Q92935 676 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 RNF31Q96EP0 1072 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 MED8Q96G25 268 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 RUNDC3BQ96NL0 473 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CATSPER2Q96P56 530 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 OR2A14Q96R47 310 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 TWSG1Q9GZX9 223 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 LHX9Q9NQ69 397 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 IL17BQ9UHF5 180 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 KCND3Q9UK17 655 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CROTQ9UKG9 612 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 PLAGL1Q9UM63 463 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 CRYL1Q9Y2S2 319 aa11.5□□□□□ -0.57
HMGN1-213ENST00000482192 IGSF10Q6WRI0 2623 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 A0A0J9YY10 115 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 ISM1B1AKI9 464 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 C21orf140B9A014 251 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 DNALI1O14645 258 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 NIPSNAP2O75323 286 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 C1QL1O75973 258 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 NTRK1P04629 796 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PKMP14618 531 aaKnown RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PVRP15151 417 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PGAM1P18669 254 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CHRM3P20309 590 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CD9P21926 228 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 ATP5DP30049 168 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 PTGIRP43119 386 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 DR1Q01658 176 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CDC20Q12834 499 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 TBR1Q16650 682 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 LONRF1Q17RB8 773 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 CRTC2Q53ET0 693 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-213ENST00000482192 BORAQ6PGQ7 559 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 KLHL7Q8IXQ5 586 aa11.49□□□□□ -0.57
HMGN1-213ENST00000482192 AGGF1Q8N302 714 aaeCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms