RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 F8W8V4 182 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 GFYI3L273 518 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 C1orf105O95561 183 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 VIPP01282 170 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ALDOAP04075 364 aaKnown RBP11.9□□□□□ -0.5
TRA2B-212ENST00000480461 TUBBP07437 444 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 PNLIPP16233 465 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 CD1CP29017 333 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ALDH4A1P30038 563 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ATP5DP30049 168 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 HALP42357 657 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 MSH2P43246 934 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 RPIAP49247 311 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 DAB2P98082 770 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 DLG1Q12959 904 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 USP10Q14694 798 aaKnown RBP11.9□□□□□ -0.5
TRA2B-212ENST00000480461 SYTL3Q4VX76 610 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 DHRS13Q6UX07 377 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 TMEM26Q6ZUK4 368 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 MREGQ8N565 214 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ASB11Q8WXH4 323 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 CXorf40BQ96DE9 158 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 MENTQ9BUN1 341 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 EURLQ9NYK6 297 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 TXNDC16Q9P2K2 825 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 CTNNAL1Q9UBT7 734 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 TRMT6Q9UJA5 497 aaKnown RBP11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ADAMTS6Q9UKP5 1117 aa11.9□□□□□ -0.5
TRA2B-212ENST00000480461 ZFC3H1O60293 1989 aaKnown RBP11.9□□□□□ -0.5
TRA2B-212ENST00000480461 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 IGHV1OR21-1A0A087WYE8 117 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 EXOC1LA0A1B0GW35 172 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 RHPN2P1A8MT19 583 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 OPA1O60313 960 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 PSIP1O75475 530 aaKnown RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 SLC35E2BP0CK96 405 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 KCNC1P48547 511 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 DUSP3P51452 185 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 TMED2Q15363 201 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 BEND6Q5SZJ8 279 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 ZNF574Q6ZN55 896 aaPredicted RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 LRRC69Q6ZNQ3 347 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 USP53Q70EK8 1073 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 SPRED1Q7Z699 444 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 MZB1Q8WU39 189 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 PDLIM5Q96HC4 596 aaKnown RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
TRA2B-212ENST00000480461 XKR8Q9H6D3 395 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 KIR3DX1Q9H7L2 352 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 MVB12BQ9H7P6 319 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 POT1Q9NUX5 634 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 NCKIPSDQ9NZQ3 722 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 FETUBQ9UGM5 382 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 SLC24A2Q9UI40 661 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 PLAGL1Q9UM63 463 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 ASF1AQ9Y294 204 aa11.89□□□□□ -0.51
TRA2B-212ENST00000480461 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 CDC7O00311 574 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 NTN3O00634 580 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 RFPL1O75677 317 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 TCEA3O75764 348 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 C2P06681 752 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 GP1BAP07359 652 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 INHBAP08476 426 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 NUDT17P0C025 328 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 CBSLP0DN79 551 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 SLC2A4P14672 509 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 ZNF37AP17032 561 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 CBSP35520 551 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 MAGEA12P43365 314 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 GPR3P46089 330 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 SLCO1A2P46721 670 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 IL2P60568 153 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 RAB10P61026 200 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 IRF9Q00978 393 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 INSM1Q01101 510 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 ZXDCQ2QGD7 858 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 TMPRSS12Q86WS5 348 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 TBC1D21Q8IYX1 336 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 PLD6Q8N2A8 252 aaKnown RBP11.88□□□□□ -0.51
TRA2B-212ENST00000480461 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
TRA2B-212ENST00000480461 OR6C4Q8NGE1 309 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms