RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PRKD1Q15139 912 aaPredicted RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 ZIC1Q15915 447 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 FIGNQ5HY92 759 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 RPUSD3Q6P087 351 aaKnown RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 ZNF449Q6P9G9 518 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 VSIG1Q86XK7 387 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 CATSPER1Q8NEC5 780 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 IPMKQ8NFU5 416 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 TFGQ92734 400 aaPredicted RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 CHRNA10Q9GZZ6 450 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 OR52A5Q9H2C5 316 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 SUCOQ9UBS9 1254 aaKnown RBP16.55■□□□□ 0.24
VIM-204ENST00000478746 ARL5AQ9Y689 179 aa16.55■□□□□ 0.24
VIM-204ENST00000478746 C2orf81A6NN90 581 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 SOCS6O14544 535 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 H2AFZP0C0S5 128 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 ATP1B2P14415 290 aaPredicted RBP16.54■□□□□ 0.24
VIM-204ENST00000478746 UGT2B7P16662 529 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 PDHA2P29803 388 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 PRLHRP49683 370 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 MESDQ14696 234 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 ISLR2Q6UXK2 745 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 LINC00696Q6ZRV3 163 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 H2AFVQ71UI9 128 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 BZW1Q7L1Q6 419 aaKnown RBP16.54■□□□□ 0.24
VIM-204ENST00000478746 PID1Q7Z2X4 250 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 NXPE1Q8N323 547 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 OR4K2Q8NGD2 314 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 OR1N1Q8NGS0 311 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 TFB1MQ8WVM0 346 aaKnown RBP16.54■□□□□ 0.24
VIM-204ENST00000478746 THOC3Q96J01 351 aaKnown RBP16.54■□□□□ 0.24
VIM-204ENST00000478746 OR2A14Q96R47 310 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 FCRL5Q96RD9 977 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 LMF1Q96S06 567 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 HGH1Q9BTY7 390 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 NAT10Q9H0A0 1025 aaKnown RBP16.54■□□□□ 0.24
VIM-204ENST00000478746 COG4Q9H9E3 785 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 SLC22A11Q9NSA0 550 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 CRLS1Q9UJA2 301 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 NUP210LQ5VU65 1888 aa16.54■□□□□ 0.24
VIM-204ENST00000478746 A0A1B0GTH6 734 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 CFAP99D6REC4 459 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 MPP3Q13368 585 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 BOP1Q14137 746 aaKnown RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 ZNF630Q2M218 657 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 VWA2Q5GFL6 755 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 ZNF324BQ6AW86 544 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 KIRREL2Q6UWL6 708 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 BNC2Q6ZN30 1099 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 UNC5AQ6ZN44 842 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 OVCH1Q7RTY7 1134 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 MRGPRGQ86SM5 289 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 DNAJC22Q8N4W6 341 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 RNF25Q96BH1 459 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 OXNAD1Q96HP4 312 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 MAGEB10Q96LZ2 347 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 KLHL8Q9P2G9 620 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 SAE1Q9UBE0 346 aaPredicted RBP16.53■□□□□ 0.24
VIM-204ENST00000478746 FKBPLQ9UIM3 349 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 PLCL2Q9UPR0 1127 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 ICKQ9UPZ9 632 aa16.53■□□□□ 0.24
VIM-204ENST00000478746 TRGV8A0A0C4DH27 118 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 AGAP14A8MT82 685 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 SMTNL1A8MU46 457 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 PCDH17O14917 1159 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 ALBP02768 609 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 NR2C2P49116 596 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 RPA4Q13156 261 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 NR1I3Q14994 352 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 TAF1AQ15573 450 aaPredicted RBP16.52■□□□□ 0.24
VIM-204ENST00000478746 SLC5A12Q1EHB4 618 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 TUBB8Q3ZCM7 444 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 ZNF808Q8N4W9 903 aaPredicted RBP16.52■□□□□ 0.24
VIM-204ENST00000478746 HEXDCQ8WVB3 486 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 CTNNBL1Q8WYA6 563 aaPredicted RBP16.52■□□□□ 0.24
VIM-204ENST00000478746 DLG3Q92796 817 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 FKBP10Q96AY3 582 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 ULK4Q96C45 1275 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 VPS50Q96JG6 964 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 COPS8Q99627 209 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 FSD1LQ9BXM9 530 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 FAM96AQ9H5X1 160 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 WDR54Q9H977 334 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 HS3ST3B1Q9Y662 390 aa16.52■□□□□ 0.24
VIM-204ENST00000478746 NF1P21359 2839 aa16.52■□□□□ 0.23
VIM-204ENST00000478746 A0A0J9YY10 115 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 C5orf60A6NFR6 353 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 CCL21O00585 134 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 KLHL18O94889 574 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 AGTP01019 485 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 CHRM5P08912 532 aaPredicted RBP16.51■□□□□ 0.23
VIM-204ENST00000478746 SHMT2P34897 504 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 ARSFP54793 590 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 TMPRSS15P98073 1019 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 XIAPP98170 497 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 TYRO3Q06418 890 aa16.51■□□□□ 0.23
VIM-204ENST00000478746 MFAP5Q13361 173 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms