RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CIDEBQ9UHD4 219 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 TSR3Q9UJK0 312 aaKnown RBP15.12■□□□□ 0.01
HMGA1-206ENST00000478214 FBXO5Q9UKT4 447 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 CHMP2BQ9UQN3 213 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 RUVBL2Q9Y230 463 aaKnown RBP15.12■□□□□ 0.01
HMGA1-206ENST00000478214 PCDHB11Q9Y5F2 797 aa15.12■□□□□ 0.01
HMGA1-206ENST00000478214 MATN2O00339 956 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 HAUS5O94927 633 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 PRDX3P30048 256 aaKnown RBP15.11■□□□□ 0.01
HMGA1-206ENST00000478214 SHMT2P34897 504 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ARL4DP49703 201 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ARL4CP56559 192 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 CXADRP78310 365 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 GBX1Q14549 363 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 CNSTQ6PJW8 725 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 UNC5DQ6UXZ4 953 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 VASH2Q86V25 355 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 KMT5CQ86Y97 462 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 SKA2Q8WVK7 121 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-206ENST00000478214 CFAP36Q96G28 342 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ZPBPQ9BS86 351 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 SPRY4Q9C004 299 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ACTR10Q9NZ32 417 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ZC3H7BQ9UGR2 993 aaKnown RBP15.11■□□□□ 0.01
HMGA1-206ENST00000478214 MED16Q9Y2X0 877 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 TEX264Q9Y6I9 313 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 ADAMTS20P59510 1910 aa15.11■□□□□ 0.01
HMGA1-206ENST00000478214 PIPSLA2A3N6 862 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 SLC9B1P1A6NJY1 282 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 C2orf74A8MZ97 194 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 E5RI56 91 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 EFSO43281 561 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 STK17BO94768 372 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ZBTB11O95625 1053 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-206ENST00000478214 EBLN1P0CF75 366 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ZNF28P17035 718 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CDH3P22223 829 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 UCNP55089 124 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 TMPRSS3P57727 454 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 HSD11B2P80365 405 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 TUBB3Q13509 450 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 GRB7Q14451 532 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 IL11RAQ14626 422 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 FASTKD3Q14CZ7 662 aaKnown RBP15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ACSBG2Q5FVE4 666 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ANKMY2Q8IV38 441 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 DCUN1D3Q8IWE4 304 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CARFQ8N187 725 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 D2HGDHQ8N465 521 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 ZBTB2Q8N680 514 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 LMNTD1Q8N9Z9 388 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 C2CD4AQ8NCU7 369 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-206ENST00000478214 NKD1Q969G9 470 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 LRRC39Q96DD0 335 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CERS2Q96G23 380 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 IL17FQ96PD4 163 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CCNL2Q96S94 520 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-206ENST00000478214 SLC30A3Q99726 388 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CCDC68Q9H2F9 335 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 LATS2Q9NRM7 1088 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 C1GALT1Q9NS00 363 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 SPHK1Q9NYA1 384 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 OR6C2Q9NZP2 312 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 SLC17A6Q9P2U8 582 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 CDC23Q9UJX2 597 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 PILRAQ9UKJ1 303 aa15.1■□□□□ 0.01
HMGA1-206ENST00000478214 FAM208BQ5VWN6 2430 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 SDK2Q58EX2 2172 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 RAD1O60671 282 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 URI1O94763 535 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 C1orf105O95561 183 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 RPN2P04844 631 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 CHRM5P08912 532 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 FGF5P12034 268 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 PVRP15151 417 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 ST6GAL1P15907 406 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 GABRB3P28472 473 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 PKLRP30613 574 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 CARSP49589 748 aaKnown RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 CLCN7P51798 805 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 PDIA2Q13087 525 aaKnown RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 KYNUQ16719 465 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 CCSMST1Q4G0I0 132 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 MANEAQ5SRI9 462 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 ARHGAP40Q5TG30 622 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 STEAP4Q687X5 459 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 DUPD1Q68J44 220 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 TRMT10BQ6PF06 316 aaKnown RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 SPESP1Q6UW49 350 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 TIPARPQ7Z3E1 657 aaKnown RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 TRIM73Q86UV7 250 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 BBOF1Q8ND07 529 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 GIMAP7Q8NHV1 300 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 ZNF592Q92610 1267 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 AARSD1Q9BTE6 412 aaKnown RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 MENTQ9BUN1 341 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 PITPNM3Q9BZ71 974 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 KLHL25Q9H0H3 589 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms