RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PIH1D1Q9NWS0 290 aaKnown RBP16.15■□□□□ 0.18
TRIM13-208ENST00000478111 SPHK1Q9NYA1 384 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 LUZP4Q9P127 313 aa16.15■□□□□ 0.18
TRIM13-208ENST00000478111 MROH6A6NGR9 719 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 TCP11X1B4DZS4 312 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 DPM1O60762 260 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 AGFG2O95081 481 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 HBQ1P09105 142 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 UGT2B7P16662 529 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 GDF10P55107 478 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 POU6F1Q14863 301 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 C4orf17Q53FE4 359 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 SLC6A19Q695T7 634 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 HPS6Q86YV9 775 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 C19orf47Q8N9M1 422 aaKnown RBP16.14■□□□□ 0.17
TRIM13-208ENST00000478111 FAM71DQ8N9W8 422 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 PNPLA2Q96AD5 504 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 DHRS4Q9BTZ2 278 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 CHRNA10Q9GZZ6 450 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 LRRC40Q9H9A6 602 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 GPR83Q9NYM4 423 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 SMARCAL1Q9NZC9 954 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 POLEQ07864 2286 aa16.14■□□□□ 0.17
TRIM13-208ENST00000478111 SLC5A10A0PJK1 596 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 BHMG1C9JSJ3 638 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 LIN7AO14910 233 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 MAP3K7O43318 606 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 CHRM5P08912 532 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 AGXTP21549 392 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 NSG1P42857 185 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 RRADP55042 308 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 KLF1Q13351 362 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 RAPSNQ13702 412 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 DEFB110Q30KQ9 67 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 RHBDD2Q6NTF9 364 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 ZNF449Q6P9G9 518 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 RAD9BQ6WBX8 426 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 NAPRTQ6XQN6 538 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 ARHGEF18Q6ZSZ5 1173 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 MRGPREQ86SM8 312 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 LURAP1LQ8IV03 231 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 TMEM151BQ8IW70 566 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 TCTN2Q96GX1 697 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 PANX2Q96RD6 677 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 SLC7A5P2Q9GIP4 190 aa16.13■□□□□ 0.17
TRIM13-208ENST00000478111 PLEKHB1Q9UF11 243 aaPredicted RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 R3HDM2Q9Y2K5 976 aaKnown RBP16.13■□□□□ 0.17
TRIM13-208ENST00000478111 OR51F1A6NGY5 319 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 C9J4A7 227 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 ZNF189O75820 626 aaPredicted RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 OR2B3O76000 313 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 AP2A1O95782 977 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 PEBP1P30086 187 aaKnown RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 OTX2P32243 289 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 FOXN2P32314 431 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 SHMT2P34897 504 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 FOXL2P58012 376 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 MRPL49Q13405 166 aaKnown RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 ITIH4Q14624 930 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 EIF2S3LQ2VIR3 472 aaKnown RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 PLEKHN1Q494U1 663 aaPredicted RBP16.12■□□□□ 0.17
TRIM13-208ENST00000478111 C1orf189Q5VU69 101 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 MLIPQ5VWP3 458 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 PACS1Q6VY07 963 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 TBC1D21Q8IYX1 336 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 GPR135Q8IZ08 494 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 DNAJC22Q8N4W6 341 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 OR5K2Q8NHB8 316 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 SLC35B2Q8TB61 432 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 SSC4DQ8WTU2 575 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 ELMO1Q92556 727 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 LRRC45Q96CN5 670 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 C19orf60Q96EN9 201 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 SGSM3Q96HU1 749 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 SLAMF7Q9NQ25 335 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 ASF1AQ9Y294 204 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 AP1M2Q9Y6Q5 423 aa16.12■□□□□ 0.17
TRIM13-208ENST00000478111 TCRBV7S2A1N4TA0A589 114 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 CCDC78A2IDD5 438 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 CCDC162PA2VCL2 907 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
TRIM13-208ENST00000478111 CETN2P41208 172 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 GCGRP47871 477 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 SSPNQ14714 243 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 BRD3Q15059 726 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 MRPL14Q6P1L8 145 aaKnown RBP16.11■□□□□ 0.17
TRIM13-208ENST00000478111 TMTC1Q8IUR5 882 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 ACRBPQ8NEB7 543 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 OR6C2Q9NZP2 312 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 C5AR2Q9P296 337 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 DHCR7Q9UBM7 475 aaKnown RBP16.11■□□□□ 0.17
TRIM13-208ENST00000478111 POLG2Q9UHN1 485 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 PLAGL1Q9UM63 463 aa16.11■□□□□ 0.17
TRIM13-208ENST00000478111 G3BP2Q9UN86 482 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms