RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FIP1L1Q6UN15 594 aaKnown RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 DLK2Q6UY11 383 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF517Q6ZMY9 492 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 DPY19L3Q6ZPD9 716 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 SLC16A12Q6ZSM3 486 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PLEKHM3Q6ZWE6 761 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PRSS42Q7Z5A4 293 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 MILR1Q7Z6M3 343 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ASPGQ86U10 573 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TLK2Q86UE8 772 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 P2RY8Q86VZ1 359 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PROSER1Q86XN7 944 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 STX12Q86Y82 276 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PHF13Q86YI8 300 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ADGRG5Q8IZF4 528 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 CBR4Q8N4T8 237 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PPM1NQ8N819 430 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NIPA2Q8N8Q9 360 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 KDM1BQ8NB78 822 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF555Q8NEP9 628 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 BPIFB6Q8NFQ5 453 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 KBTBD8Q8NFY9 601 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 OR7D4Q8NG98 312 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PSMA8Q8TAA3 256 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TEX47Q8TBZ9 253 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ZFP90Q8TF47 636 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 LPAR1Q92633 364 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 GTF2H4Q92759 462 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 UFD1Q92890 307 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 SNAPC3Q92966 411 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NXNL1Q96CM4 212 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TUBGCP3Q96CW5 907 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ST6GAL2Q96JF0 529 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ELMO2Q96JJ3 720 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 QKIQ96PU8 341 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 SLITRK1Q96PX8 696 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NODALQ96S42 347 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 FAM118BQ9BPY3 351 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 FEM1AQ9BSK4 669 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NUAK2Q9H093 628 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 AP5M1Q9H0R1 490 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 IKZF4Q9H2S9 585 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM245Q9H330 911 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NARFLQ9H6Q4 476 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 KAT8Q9H7Z6 458 aaKnown RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NOL11Q9H8H0 719 aaKnown RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 COG4Q9H9E3 785 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 UCK1Q9HA47 277 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 C3orf14Q9HBI5 128 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 LRRC4Q9HBW1 653 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ZFP14Q9HCL3 533 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ALG13Q9NP73 1137 aaKnown RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 IGSF5Q9NSI5 407 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 MED9Q9NWA0 146 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PAQR5Q9NXK6 330 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 SCN3BQ9NY72 215 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TAS2R9Q9NYW1 312 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 USE1Q9NZ43 259 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 ADA2Q9NZK5 511 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 CLEC1BQ9P126 229 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 FNIP2Q9P278 1114 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM181Q9P2C4 612 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 CGGBP1Q9UFW8 167 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TEKT2Q9UIF3 430 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 OSGIN1Q9UJX0 560 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 AJAP1Q9UKB5 411 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 GMEB2Q9UKD1 530 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TRHDEQ9UKU6 1024 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 DNPEPQ9ULA0 475 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 STAP1Q9ULZ2 295 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 DIMT1Q9UNQ2 313 aaKnown RBP4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PDE10AQ9Y233 779 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 TMX2Q9Y320 296 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 NDUFAF1Q9Y375 327 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 PRELID3BQ9Y3B1 194 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 RIPK3Q9Y572 518 aa4.63□□□□□ -1.67
PTCD3-212ENST00000477520 SSC5DA1L4H1 1573 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 A0A075B6Q4 140 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 hCG_1818297A0A087WSY0 165 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 IGKV6D-41A0A0C4DH26 115 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 hCG_1642624A0A1W2PR95 340 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 MANSC4A6NHS7 340 aaPredicted RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 KRBOX1C9JBD0 128 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 E7ENX8 843 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SMIM22K7EJ46 135 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 UBXN8O00124 270 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 DLGAP1O14490 977 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SOCS2O14508 198 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CTDSP2O14595 271 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CFLARO15519 480 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 TGFB1I1O43294 461 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PROM1O43490 865 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CA12O43570 354 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PRPSAP2O60256 369 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PTP4A3O75365 173 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 PSIP1O75475 530 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 CABYRO75952 493 aa4.62□□□□□ -1.67
PTCD3-212ENST00000477520 SRP72O76094 671 aaKnown RBP4.62□□□□□ -1.67
PTCD3-212ENST00000477520 ALDH1A2O94788 518 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms