RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 TEX264Q9Y6I9 313 aa13.03□□□□□ -0.32
ACTN4-205ENST00000477174 PIPSLA2A3N6 862 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 GSAPA4D1B5 854 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 E5RI56 91 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 BTN3A1O00481 513 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 NIPSNAP2O75323 286 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 BANF1O75531 89 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 TPBGLP0DKB5 382 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ERVK-10P10266 1014 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 FGF5P12034 268 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ELK3P41970 407 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 SLC1A2P43004 574 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 RPL21P46778 160 aaKnown RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ACY1Q03154 408 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 CALCOCO2Q13137 446 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 FRG1Q14331 258 aaKnown RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 GBX1Q14549 363 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 TGIF1Q15583 401 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ZNF789Q5FWF6 425 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 KIAA0408Q6ZU52 694 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 PPP1R3BQ86XI6 285 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 DCUN1D3Q8IWE4 304 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 CFAP61Q8NHU2 1237 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 MAGEC3Q8TD91 643 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 SKA2Q8WVK7 121 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 KCNJ9Q92806 393 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 NKD1Q969G9 470 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 PITPNM3Q9BZ71 974 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 TWSG1Q9GZX9 223 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 APMAPQ9HDC9 416 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 IARS2Q9NSE4 1012 aaKnown RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ACTR10Q9NZ32 417 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ICKQ9UPZ9 632 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 BTRCQ9Y297 605 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-205ENST00000477174 PTPRQQ9UMZ3 2332 aa13.02□□□□□ -0.33
ACTN4-205ENST00000477174 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 SLC9B1P1A6NJY1 282 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 E7ESA3 106 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 RAD51CO43502 376 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 STK17BO94768 372 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 HAUS5O94927 633 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 MATN4O95460 622 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CHRM5P08912 532 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-205ENST00000477174 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 FOLR1P15328 257 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CDH3P22223 829 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CCNFP41002 786 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 RAB28P51157 221 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CLCN7P51798 805 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 TUBB4BP68371 445 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
ACTN4-205ENST00000477174 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 VAC14Q08AM6 782 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 KIR2DS3Q14952 304 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 KYNUQ16719 465 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 TTLL9Q3SXZ7 439 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 STEAP4Q687X5 459 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 ZNF549Q6P9A3 640 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 SPESP1Q6UW49 350 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CCDC81Q6ZN84 652 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 GPR155Q7Z3F1 870 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 GALNT7Q86SF2 657 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CNTN4Q8IWV2 1026 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 UNC5BQ8IZJ1 945 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 ZBTB2Q8N680 514 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 NLGN4YQ8NFZ3 816 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-205ENST00000477174 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 SLC22A18Q96BI1 424 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 CERS2Q96G23 380 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 PWWP2AQ96N64 755 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 NRTNQ99748 197 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 SYTL2Q9HCH5 934 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-205ENST00000477174 FGF21Q9NSA1 209 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
ACTN4-205ENST00000477174 FAM208BQ5VWN6 2430 aa13□□□□□ -0.33
ACTN4-205ENST00000477174 K7ENP7 123 aa13□□□□□ -0.33
ACTN4-205ENST00000477174 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
ACTN4-205ENST00000477174 EFSO43281 561 aa13□□□□□ -0.33
ACTN4-205ENST00000477174 URI1O94763 535 aaPredicted RBP13□□□□□ -0.33
ACTN4-205ENST00000477174 C1orf105O95561 183 aa13□□□□□ -0.33
ACTN4-205ENST00000477174 CD9P21926 228 aa13□□□□□ -0.33
ACTN4-205ENST00000477174 SKIV2L2P42285 1042 aaKnown RBP13□□□□□ -0.33
ACTN4-205ENST00000477174 CARSP49589 748 aaKnown RBP13□□□□□ -0.33
ACTN4-205ENST00000477174 CXADRP78310 365 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms