RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 IL6P05231 212 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ANXA5P08758 320 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 HNRNPA1P09651 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CD70P32970 193 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 RPL38P63173 70 aaKnown RBP16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CBX2Q14781 532 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CACHD1Q5VU97 1274 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 DNAJB8Q8NHS0 232 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ASIC4Q96FT7 647 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 SH3GL1Q99961 368 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ZNF639Q9UID6 485 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 C2orf16Q68DN1 1984 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 A0A087WXM4 84 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 A0A1W2PQ67 120 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 XYLBO75191 536 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 STK16O75716 305 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CEBPBP17676 345 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 GKP32189 559 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 OR4D2P58180 307 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ARHGAP15Q53QZ3 475 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CRTC1Q6UUV9 634 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 USP45Q70EL2 814 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 FKBP9P1Q75LS8 142 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 GPR26Q8NDV2 337 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 BPIFB1Q8TDL5 484 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 SLC13A3Q8WWT9 602 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ULK4Q96C45 1275 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 ECHDC3Q96DC8 303 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 MPP4Q96JB8 637 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 PPM1MQ96MI6 270 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CCDC115Q96NT0 180 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 HBEGFQ99075 208 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CHID1Q9BWS9 393 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 CPEB1Q9BZB8 566 aaKnown RBP16.1■□□□□ 0.17
TMEM53-208ENST00000476724 DPY30Q9C005 99 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 TNKS2Q9H2K2 1166 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 TDP1Q9NUW8 608 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 SMPD3Q9NY59 655 aaPredicted RBP16.1■□□□□ 0.17
TMEM53-208ENST00000476724 PIKFYVEQ9Y2I7 2098 aa16.1■□□□□ 0.17
TMEM53-208ENST00000476724 NPIPB15A6NHN6 443 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TRIM64CA6NLI5 447 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 PLOD2O00469 737 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 FGF19O95750 216 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ANXA6P08133 673 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 GGT1P19440 569 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 DDX6P26196 483 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 RPS9P46781 194 aaKnown RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 IMPG1Q17R60 797 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TTC33Q6PID6 262 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 RIMKLAQ8IXN7 391 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 FAM9CQ8IZT9 166 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TCAIMQ8N3R3 496 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 DHRSXQ8N5I4 330 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ADAMTS16Q8TE57 1224 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 USP7Q93009 1102 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 COPS8Q99627 209 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 LINC00597Q9H2U6 94 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 SLC32A1Q9H598 525 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 SUV39H2Q9H5I1 410 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 GORASP2Q9H8Y8 452 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 LRTM1Q9HBL6 345 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 KLQ9UEF7 1012 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 INTS6Q9UL03 887 aaKnown RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ZNF490Q9ULM2 529 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 HS3ST2Q9Y278 367 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 CEPT1Q9Y6K0 416 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TRIM64A6NGJ6 449 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 LOC730098B7Z3J9 87 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 MANBAO00462 879 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TRANK1O15050 2925 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 KRT6AP02538 564 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 KRT6BP04259 564 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 CHRM1P11229 460 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 SRCP12931 536 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 GGT5P36269 586 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 GDF5P43026 501 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 KRT6CP48668 564 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 DGKQP52824 942 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ARHGEF7Q14155 803 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 MAPKAPK3Q16644 382 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 FAM98BQ52LJ0 330 aaKnown RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 RALGPS2Q86X27 583 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ZSWIM9Q86XI8 627 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 ITFG1Q8TB96 612 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 RNF145Q96MT1 663 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 SAMD11Q96NU1 681 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 YTHDF1Q9BYJ9 559 aaKnown RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 NKX2-4Q9H2Z4 354 aa16.09■□□□□ 0.17
TMEM53-208ENST00000476724 HECAQ9UBI9 543 aaPredicted RBP16.09■□□□□ 0.17
TMEM53-208ENST00000476724 EPOPA6NHQ4 379 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 EI24O14681 340 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 CLOCKO15516 846 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 DEAF1O75398 565 aaPredicted RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 RSL1D1O76021 490 aaKnown RBP16.08■□□□□ 0.16
TMEM53-208ENST00000476724 CLDN9O95484 217 aa16.08■□□□□ 0.16
TMEM53-208ENST00000476724 OR56A5P0C7T3 313 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms