RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 LCP2Q13094 533 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TUBB3Q13509 450 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 DPYSQ14117 519 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 VEPH1Q14D04 833 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ABRAXAS2Q15018 415 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 HKDC1Q2TB90 917 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 FAM45BPQ6NSW5 357 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SHQ1Q6PI26 577 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CYP20A1Q6UW02 462 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 BTLAQ7Z6A9 289 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ISCA2Q86U28 154 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 FAM20CQ8IXL6 584 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CRYBG2Q8N1P7 616 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SFRP1Q8N474 314 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 KCT2Q8NC54 265 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 FAM45AQ8TCE6 357 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PROX1Q92786 737 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ZHX1-C8orf76Q96EF9 292 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 AARSD1Q9BTE6 412 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 LINC00597Q9H2U6 94 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 RPF2Q9H7B2 306 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 BEX1Q9HBH7 125 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TAS2R16Q9NYV7 291 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ANKRD6Q9Y2G4 727 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 POLEQ07864 2286 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 C16orf96A6NNT2 1141 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 NEDD8-MDP1E9PL57 170 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 GNB5O14775 395 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 VILLO15195 856 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CCL16O15467 120 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PRAMEF12O95522 483 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CH25HO95992 272 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TGFB1P01137 390 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CD72P21854 359 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 LPOP22079 712 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PRKAA2P54646 552 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CDH12P55289 794 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SRP54P61011 504 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ACSM2AQ08AH3 577 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 KCNAB2Q13303 367 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TECRLQ5HYJ1 363 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF678Q5SXM1 525 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ACSM2BQ68CK6 577 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CCSAPQ6IQ19 270 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL17Q6TDP4 642 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SLC15A4Q8N697 577 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TOP6BLQ8N6T0 577 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SEPT8Q92599 483 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TBX5Q99593 518 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 COPS8Q99627 209 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 MACROD1Q9BQ69 325 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 NKX2-4Q9H2Z4 354 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 MAGEE1Q9HCI5 957 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SEPT3Q9UH03 358 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SORCS3Q9UPU3 1222 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ARIH1Q9Y4X5 557 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PCDHB3Q9Y5E6 796 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 N6AMT1Q9Y5N5 214 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PSME4Q14997 1843 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PCM1Q15154 2024 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SPTA1P02549 2419 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TNFRSF10BO14763 440 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 RAD51BO15315 384 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 HYAL3O43820 417 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 H2AFYO75367 372 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 RPP40O75818 363 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 FGBP02675 491 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ANXA6P08133 673 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 GABRR2P28476 465 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 HERVK_113P63132 956 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SPIBQ01892 262 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 LSAMPQ13449 338 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TUSC3Q13454 348 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 GTF2H2Q13888 395 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 MYBPC3Q14896 1274 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ACAP2Q15057 778 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ACOX1Q15067 660 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PHKG1Q16816 387 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 INSCQ1MX18 579 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 BROXQ5VW32 411 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 GTF2H2CQ6P1K8 395 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 RRM2BQ7LG56 351 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CLECL1Q8IZS7 167 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CMTM8Q8IZV2 173 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL23Q8NBE8 558 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 DLG3Q92796 817 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 TOP1MTQ969P6 601 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CLIP3Q96DZ5 547 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 CEP295NLQ96MC4 621 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PRICKLE1Q96MT3 831 aaPredicted RBP4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PKP4Q99569 1192 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ERVK-6Q9BXR3 956 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 PRKD2Q9BZL6 878 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 SLC25A51Q9H1U9 297 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL1Q9NR64 748 aa4.89□□□□□ -1.63
CCDC39-204ENST00000476379 ATP6V1HQ9UI12 483 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms