RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 THUMPD3Q9BV44 507 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 TSSK1BQ9BXA7 367 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 DGCR6LQ9BY27 220 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 NLNQ9BYT8 704 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 DUSP15Q9H1R2 295 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 NEUROG2Q9H2A3 272 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 LRRN3Q9H3W5 708 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 NOL6Q9H6R4 1146 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 KAT8Q9H7Z6 458 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 ARMT1Q9H993 441 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MRPL44Q9H9J2 332 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 LRRC4Q9HBW1 653 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GLOD4Q9HC38 313 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ANKHQ9HCJ1 492 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MRPL47Q9HD33 250 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 PARD6AQ9NPB6 346 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GDF3Q9NR23 364 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 SACM1LQ9NTJ5 587 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ERAP1Q9NZ08 941 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 CXXC1Q9P0U4 656 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 GMPR2Q9P2T1 348 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 NDOR1Q9UHB4 597 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ADAM28Q9UKQ2 775 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TCFL5Q9UL49 500 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 MKLN1Q9UL63 735 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 BAIAP2Q9UQB8 552 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 GRIP1Q9Y3R0 1128 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 UGT2A1Q9Y4X1 527 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 POLR3HQ9Y535 204 aaPredicted RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 PSAT1Q9Y617 370 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ALG5Q9Y673 324 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 COPG1Q9Y678 874 aaKnown RBP3.79□□□□□ -1.8
LSM2-211ENST00000475835 CLCA3PQ9Y6N3 262 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 TANC1Q9C0D5 1861 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ANKRD36CQ5JPF3 1778 aa3.79□□□□□ -1.8
LSM2-211ENST00000475835 ZMYM2Q9UBW7 1377 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 ZNF142P52746 1687 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 FAM205AQ6ZU69 1335 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 RPTORQ8N122 1335 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 DNAJC25-GNG10A0A024R161 153 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A0A6YYK5 440 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A0G2JMP0 313 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A1B0GV90 55 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A1W2PQ27 194 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A1W2PQ64 194 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A0A1W2PQD8 194 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 LNP1A1A4G5 178 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 USP17L4A6NCW7 530 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 MROH6A6NGR9 719 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 A6NIZ1 184 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NUTM2BA6NNL0 878 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 ZNF716A6NP11 495 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 MPTX1A8MV57 137 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 HACD1B0YJ81 288 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NUTM2EB1AL46 878 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 TISP43B9A030 160 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 B9A039 149 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NEDD8-MDP1E9PL57 170 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 H7C2Y5 167 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PIK3R2O00459 728 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 KPNA3O00505 521 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 DDX3XO00571 662 aaKnown RBP eCLIP3.78□□□□□ -1.83e-17■■■□□ 15.2
LSM2-211ENST00000475835 LDLRAD4O15165 306 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 SMAD9O15198 467 aaKnown RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 PRODHO43272 600 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 LRRTM2O43300 516 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 MED7O43513 233 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 BUD23O43709 281 aaKnown RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 AVILO75366 819 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PMPCBO75439 489 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 ERN1O75460 977 aaKnown RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 TAF5LO75529 589 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 SLC22A5O76082 557 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 CNTN5O94779 1100 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 SEC24AO95486 1093 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PRAMEF12O95522 483 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NTSR2O95665 410 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NDST3O95803 873 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 LDLRP01130 860 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PPBPP02775 128 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 GSNP06396 782 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 GUSBP08236 651 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 HCKP08631 526 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 USP17L8P0C7I0 530 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 FAM58BPP0C7Q3 252 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 ZNF735P0CB33 412 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 JUPP14923 745 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 CD1EP15812 388 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 JUNDP17535 347 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PFKLP17858 780 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PSMC3P17980 439 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 ERCC2P18074 760 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 ITIH2P19823 946 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 OGNP20774 298 aaKnown RBP3.78□□□□□ -1.8
LSM2-211ENST00000475835 ABCB4P21439 1286 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 FGFR3P22607 806 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 NR4A1P22736 598 aa3.78□□□□□ -1.8
LSM2-211ENST00000475835 PTPREP23469 700 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms