RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 TWIST2Q8WVJ9 160 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 CLDN23Q96B33 292 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 SCARF2Q96GP6 870 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 PRR11Q96HE9 360 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 MAELQ96JY0 434 aaKnown RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 WDR92Q96MX6 357 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 KCNA7Q96RP8 456 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 TM7SF3Q9NS93 570 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 WSB2Q9NYS7 404 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 ACSL5Q9ULC5 683 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 SUFUQ9UMX1 484 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
TRAF4-210ENST00000475329 TP53BP1Q12888 1972 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-210ENST00000475329 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PRSS38A1L453 326 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 E9PBE3 544 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PRAMEF26H0Y7S4 382 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 IFRD1O00458 451 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 KLHL41O60662 606 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 ATP5HO75947 161 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 RPN2P04844 631 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 IGHV4-34P06331 123 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 SLC35G4P0C7Q5 338 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 NCF2P19878 526 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 HTR1BP28222 390 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 GDF5P43026 501 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 FOXA1P55317 472 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 ERVPABLB-1P60509 514 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PFN3P60673 137 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 YPEL5P62699 121 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 TRAF3Q13114 568 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PTCHD3Q3KNS1 767 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 LSM12Q3MHD2 195 aaKnown RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 UGT3A2Q3SY77 523 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PYCR3Q53H96 274 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 LETMD1Q6P1Q0 360 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 GCNT7Q6ZNI0 430 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 CHST15Q7LFX5 561 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 HOMEZQ8IX15 550 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 DDIASQ8IXT1 998 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 GJD3Q8N144 294 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 OR4F6Q8NGB9 312 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 OR52B6Q8NGF0 335 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 BMFQ96LC9 184 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 OR2M4Q96R27 311 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PKP4Q99569 1192 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 GPR174Q9BXC1 333 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 TPSD1Q9BZJ3 242 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 DNAJC11Q9NVH1 559 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 STOX2Q9P2F5 926 aaPredicted RBP13.38□□□□□ -0.27
TRAF4-210ENST00000475329 TRPS1Q9UHF7 1281 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 CA5BQ9Y2D0 317 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 DNAJC15Q9Y5T4 150 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 HS3ST3A1Q9Y663 406 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 UNC80Q8N2C7 3258 aa13.38□□□□□ -0.27
TRAF4-210ENST00000475329 PCM1Q15154 2024 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 KRT87PA6NCN2 255 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 H0Y8X5 98 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 MYO1CO00159 1063 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 PIP5K1BO14986 540 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 VPS4BO75351 444 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 FUCA1P04066 466 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 HGFP14210 728 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 HMOX2P30519 316 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 GNPDA1P46926 289 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 SCTRP47872 440 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 THOP1P52888 689 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 UBAP2LQ14157 1087 aaKnown RBP13.37□□□□□ -0.27
TRAF4-210ENST00000475329 CCSMST1Q4G0I0 132 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 MILR1Q7Z6M3 343 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 DCUN1D3Q8IWE4 304 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 CDYL2Q8N8U2 506 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 TMEM145Q8NBT3 493 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 CEP70Q8NHQ1 597 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 IER2Q9BTL4 223 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 CCDC106Q9BWC9 280 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 ZDHHC5Q9C0B5 715 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 OSGEPL1Q9H4B0 414 aa13.37□□□□□ -0.27
TRAF4-210ENST00000475329 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
TRAF4-210ENST00000475329 MRPL40Q9NQ50 206 aaKnown RBP13.37□□□□□ -0.27
TRAF4-210ENST00000475329 MUTYHQ9UIF7 546 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms