RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ARHGEF33A8MVX0 844 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 TARM1B6A8C7 271 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SLCO1B7G3V0H7 640 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 GFYI3L273 518 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 HGSO14964 777 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CLGNO14967 610 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 STK16O75716 305 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 C1orf105O95561 183 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 OTCP00480 354 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 VIPP01282 170 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 ANXA6P08133 673 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 MTHFD1P11586 935 aaKnown RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 F3P13726 295 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 EPB42P16452 691 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 AK4P27144 223 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 HOXD12P35452 270 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 HSPA7P48741 367 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CCNG1P51959 295 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 NUBP1P53384 320 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 NXPH1P58417 271 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 EIF2B5Q13144 721 aaKnown RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SRSF5Q13243 272 aaKnown RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 PHKG1Q16816 387 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 PPP1R3AQ16821 1122 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 PLK5Q496M5 336 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF678Q5SXM1 525 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CAPN13Q6MZZ7 669 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 LAYNQ6UX15 382 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CYHR1Q6ZMK1 362 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 FAM83HQ6ZRV2 1179 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 FRMD7Q6ZUT3 714 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 LRRC70Q7Z2Q7 622 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 EFL1Q7Z2Z2 1120 aaKnown RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SLC9B2Q86UD5 537 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 MYLK4Q86YV6 388 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SYT12Q8IV01 421 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 LRRC34Q8IZ02 419 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SDR16C5Q8N3Y7 309 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 TEX9Q8N6V9 391 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 FBXO15Q8NCQ5 510 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 OR9A1PQ8NGU1 263 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 OR5K2Q8NHB8 316 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 BCAS4Q8TDM0 211 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 FBXL8Q96CD0 374 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 FAR2Q96K12 515 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 MAGEB10Q96LZ2 347 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 RMDN2Q96LZ7 410 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 C7orf26Q96N11 449 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SIKE1Q9BRV8 207 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 GATA5Q9BWX5 397 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CD244Q9BZW8 370 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CCDC177Q9NQR7 707 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 SPATA7Q9P0W8 599 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 RAP2CQ9Y3L5 183 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 DYRK1BQ9Y463 629 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 CFAP20Q9Y6A4 193 aaKnown RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 LRP4O75096 1905 aa10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 TP53BP1Q12888 1972 aaPredicted RBP10.01□□□□□ -0.81
PRPF38A-202ENST00000474048 ANKRD12Q6UB98 2062 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 KIR2DS5A0A0G2JLQ3 304 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 A0A0G2JNG1 304 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 A0A1B0GVT2 93 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 A0A1W2PR77 199 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 FAM86C2PA6NEL3 165 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 B4DGG1 531 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 K7EPI3 171 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 KIR2DS3K7RE56 304 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 YKT6O15498 198 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 RRP9O43818 475 aaKnown RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 DFNA5O60443 496 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 EDF1O60869 148 aaKnown RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 FAM107AO95990 144 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 CSF2P04141 144 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 SP9P0CG40 484 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 ALPPL2P10696 532 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 KITP10721 976 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 TDGF1P13385 188 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 NME1P15531 152 aaKnown RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 SEC24CP53992 1094 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 ATXN3P54252 364 aaPredicted RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 CLCQ05315 142 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 LCP2Q13094 533 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 PRKG2Q13237 762 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 GTF2H2Q13888 395 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 KIR2DS5Q14953 304 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 PCBP2Q15366 365 aaKnown RBP eCLIP10□□□□□ -0.81
PRPF38A-202ENST00000474048 DUOXA1Q1HG43 343 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 SH2D4BQ5SQS7 431 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 GTF2H2CQ6P1K8 395 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 AGTRAPQ6RW13 159 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 IL27RAQ6UWB1 636 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 WASH2PQ6VEQ5 465 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 FAM46DQ8NEK8 389 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 OR5AR1Q8NGP9 310 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 AGR3Q8TD06 166 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 MAPK15Q8TD08 544 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 TRPC4APQ8TEL6 797 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 UBTD2Q8WUN7 234 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 RHBDF1Q96CC6 855 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms