RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 FAM96AQ9H5X1 160 aa9□□□□□ -0.97
VCL-204ENST00000472585 C10orf88Q9H8K7 445 aa9□□□□□ -0.97
VCL-204ENST00000472585 DHCR7Q9UBM7 475 aaKnown RBP9□□□□□ -0.97
VCL-204ENST00000472585 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
VCL-204ENST00000472585 SERTAD3Q9UJW9 196 aa9□□□□□ -0.97
VCL-204ENST00000472585 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
VCL-204ENST00000472585 HYOU1Q9Y4L1 999 aa9□□□□□ -0.97
VCL-204ENST00000472585 CCDC66A2RUB6 948 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 GSAPA4D1B5 854 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 E7EQ34 232 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 CCL22O00626 93 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 JRKO75564 520 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 WISP2O76076 250 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 SRP72O76094 671 aaKnown RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 PRAMEF1O95521 474 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 GYPCP04921 128 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 CD1EP15812 388 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 HADHAP40939 763 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 CDKN2BP42772 138 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 TSFMP43897 325 aaKnown RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 ZBED6P86452 979 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 TMPRSS15P98073 1019 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 Q0VFX4 171 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 PRKG2Q13237 762 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 LONRF2Q1L5Z9 754 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ZNF630Q2M218 657 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 FILIP1LQ4L180 1135 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 FCRL6Q6DN72 434 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 CCDC70Q6NSX1 233 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 RHBDD2Q6NTF9 364 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 MTFR2Q6P444 385 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 IGFL2Q6UWQ7 119 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 GLT6D1Q7Z4J2 308 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 MRGPRGQ86SM5 289 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ZNF808Q8N4W9 903 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 LMNTD1Q8N9Z9 388 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ACVR1CQ8NER5 493 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 OR4K2Q8NGD2 314 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 OR13C4Q8NGS5 318 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 OR2Y1Q8NGV0 311 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 SLC35G2Q8TBE7 412 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 PPP4R1Q8TF05 950 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ITLN2Q8WWU7 325 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 RELTQ969Z4 430 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 CNDP1Q96KN2 507 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ZNF830Q96NB3 372 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 OR2A14Q96R47 310 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 FCRL5Q96RD9 977 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 FERD3LQ96RJ6 166 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 DPH2Q9BQC3 489 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 DHRS4Q9BTZ2 278 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 TRIM8Q9BZR9 551 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 DEF6Q9H4E7 631 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 TFB2MQ9H5Q4 396 aaKnown RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 ASB8Q9H765 288 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 SYTL2Q9HCH5 934 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 ATP13A2Q9NQ11 1180 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 SPHK1Q9NYA1 384 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 UVRAGQ9P2Y5 699 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 GPN3Q9UHW5 284 aaPredicted RBP8.99□□□□□ -0.97
VCL-204ENST00000472585 ICKQ9UPZ9 632 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 COLEC10Q9Y6Z7 277 aa8.99□□□□□ -0.97
VCL-204ENST00000472585 RNF223E7ERA6 249 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 SOCS6O14544 535 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 PPP1R12AO14974 1030 aaPredicted RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 STX7O15400 261 aaKnown RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 PRICKLE3O43900 615 aaPredicted RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 H2AFZP0C0S5 128 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 SLC35G4P0C7Q5 338 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 NDUFS1P28331 727 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 PEBP1P30086 187 aaKnown RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 AKT1P31749 480 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 ADRA1AP35348 466 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 FOLR3P41439 243 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 PRLHRP49683 370 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 DCDP81605 110 aaKnown RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 SRSF11Q05519 484 aaKnown RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 PRKAA1Q13131 559 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 ITGA9Q13797 1035 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 BOP1Q14137 746 aaKnown RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 ZNF169Q14929 603 aaPredicted RBP8.98□□□□□ -0.97
VCL-204ENST00000472585 CYP2A13Q16696 494 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 IRAK1BP1Q5VVH5 260 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 ZDHHC20Q5W0Z9 365 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 DENND5AQ6IQ26 1287 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 RANBP10Q6VN20 620 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 H2AFVQ71UI9 128 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 AMIGO1Q86WK6 493 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 VSIG1Q86XK7 387 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 RFX6Q8HWS3 928 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 MMP21Q8N119 569 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 DNAJC22Q8N4W6 341 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 DTWD1Q8N5C7 304 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 BCORP1Q8N888 145 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 CATSPER1Q8NEC5 780 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 PTERQ96BW5 349 aa8.98□□□□□ -0.97
VCL-204ENST00000472585 RBM41Q96IZ5 413 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms