RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C20orf96Q9NUD7 363 aaPredicted RBP8.94□□□□□ -0.98
SMC4-213ENST00000472282 ZDHHC18Q9NUE0 388 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 FAM8A1Q9UBU6 413 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 TBC1D29Q9UFV1 150 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 SLC23A2Q9UGH3 650 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 ACSL6Q9UKU0 697 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 DNAJC16Q9Y2G8 782 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 PCDHGA11Q9Y5H2 935 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 GPC6Q9Y625 555 aaPredicted RBP8.94□□□□□ -0.98
SMC4-213ENST00000472282 PRSS21Q9Y6M0 314 aa8.94□□□□□ -0.98
SMC4-213ENST00000472282 UBA6A0AVT1 1052 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 A6NCN8 305 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 TMX2-CTNND1H3BSU7 103 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 NVLO15381 856 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 NDUFS3O75489 264 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 ERVK-10P10266 1014 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 LIPCP11150 499 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 FGF3P11487 239 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 OGNP20774 298 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 PPARGP37231 505 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 SLC1A2P43004 574 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 PRLHRP49683 370 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 LIMK2P53671 638 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 EIF3BP55884 814 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 RHDQ02161 417 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 C19orf57Q0VDD7 668 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 TYSND1Q2T9J0 566 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 TAF1BQ53T94 588 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 HSP90AA5PQ58FG0 334 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 NEPROQ6NW34 567 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 TRMT10BQ6PF06 316 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 CERS6Q6ZMG9 384 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 DTX1Q86Y01 620 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 DENND6AQ8IWF6 608 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 SFRP1Q8N474 314 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 GPR150Q8NGU9 434 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 PYROXD1Q8WU10 500 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 JPH3Q8WXH2 748 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 IFT81Q8WYA0 676 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 CERS2Q96G23 380 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 ZNF514Q96K75 400 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 CCNL2Q96S94 520 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 FMO2Q99518 471 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 CMKLR1Q99788 373 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 FAM129AQ9BZQ8 928 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 IARS2Q9NSE4 1012 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 OCIAD1Q9NX40 245 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 KCNK4Q9NYG8 393 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 MTRF1LQ9UGC7 380 aaKnown RBP8.93□□□□□ -0.98
SMC4-213ENST00000472282 PCM1Q15154 2024 aa8.93□□□□□ -0.98
SMC4-213ENST00000472282 MGAQ8IWI9 3026 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 ELOA3CA0A087WX78 387 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 MGAT4DA6NG13 374 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 PRR19A6NJB7 356 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 ELOA3DA6NLF2 546 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 PRMT5O14744 637 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 SNX2O60749 519 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 POP7O75817 140 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 OR56A5P0C7T3 313 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 THRAP10827 490 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 VCLP18206 1134 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 ECHS1P30084 290 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 SSTR1P30872 391 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 MAGEA4P43358 317 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 GATA4P43694 442 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 GPR3P46089 330 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 FASLGP48023 281 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 CARSP49589 748 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 MPP1Q00013 466 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 CTBP1Q13363 440 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 BIRC2Q13490 618 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 CUL1Q13616 776 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 NFE2L1Q14494 772 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 SEPT7Q16181 437 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 LINC00303Q3SY05 128 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 ELOA3BQ3SY89 546 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 ZNF789Q5FWF6 425 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 RNF187Q5TA31 235 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 FAM83HQ6ZRV2 1179 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 AMZ2Q86W34 360 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 CILP2Q8IUL8 1156 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 PALM2Q8IXS6 379 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 LMNTD2Q8IXW0 634 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 IFT20Q8IY31 132 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 LSM14AQ8ND56 463 aaKnown RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 ELOA3Q8NG57 546 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 GSDMBQ8TAX9 411 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 HM13Q8TCT9 377 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 LKAAEAR1Q8TD35 194 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 CALML6Q8TD86 181 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 LPGAT1Q92604 370 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 LINC00615Q96LM1 132 aaPredicted RBP8.92□□□□□ -0.98
SMC4-213ENST00000472282 C9orf72Q96LT7 481 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 FAM167BQ9BTA0 163 aa8.92□□□□□ -0.98
SMC4-213ENST00000472282 PPANQ9NQ55 473 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms