RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ARL15Q9NXU5 204 aa16.42■□□□□ 0.22
CCM2-205ENST00000472223 ZNF624Q9P2J8 865 aaPredicted RBP16.42■□□□□ 0.22
CCM2-205ENST00000472223 LRIT1Q9P2V4 623 aa16.42■□□□□ 0.22
CCM2-205ENST00000472223 MID2Q9UJV3 735 aa16.42■□□□□ 0.22
CCM2-205ENST00000472223 TMCO1Q9UM00 188 aa16.42■□□□□ 0.22
CCM2-205ENST00000472223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 HMGB1P1B2RPK0 211 aaPredicted RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 AGPSO00116 658 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CDC7O00311 574 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 TRIM38O00635 465 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 NUDT21O43809 227 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 NOBOXO60393 691 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 ANXA5P08758 320 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 TAC1P20366 129 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 GLRBP48167 497 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CSRP3P50461 194 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 MAZP56270 477 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 SLC18A2Q05940 514 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 TSNQ15631 228 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 DBX2Q6ZNG2 339 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 NAXDQ8IW45 347 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CENPLQ8N0S6 344 aaPredicted RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 FBXO15Q8NCQ5 510 aaPredicted RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 LCN9Q8WX39 176 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 PATE1Q8WXA2 126 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 AHCYL2Q96HN2 611 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 APOPT1Q96IL0 206 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CNDP2Q96KP4 475 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CAMK1GQ96NX5 476 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 MRPL57Q9BQC6 102 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 UNKQ9C0B0 810 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 MRPL46Q9H2W6 279 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 SLC32A1Q9H598 525 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 KIR3DX1Q9H7L2 352 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 SLC40A1Q9NP59 571 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 SSU72Q9NP77 194 aaKnown RBP16.41■□□□□ 0.22
CCM2-205ENST00000472223 ZNF446Q9NWS9 450 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CD274Q9NZQ7 290 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 OARD1Q9Y530 152 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 GPR179Q6PRD1 2367 aa16.41■□□□□ 0.22
CCM2-205ENST00000472223 CPED1A4D0V7 1026 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 KERAO60938 352 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 SMIM24O75264 130 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 GIMD1P0DJR0 217 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 TPBGLP0DKB5 382 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 TGM1P22735 817 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 SHMT2P34897 504 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 BDKRB1P46663 353 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 UBE2IP63279 158 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 ARMC6Q6NXE6 501 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 DUS1LQ6P1R4 473 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 XKR5Q6UX68 686 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 TMEM26Q6ZUK4 368 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 CLEC14AQ86T13 490 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 ISCA2Q86U28 154 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 EXOC3L1Q86VI1 746 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 SLC35F3Q8IY50 421 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 PLD6Q8N2A8 252 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 TCAIMQ8N3R3 496 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 SREK1Q8WXA9 508 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 ATP6V1G3Q96LB4 118 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 ZMYND15Q9H091 742 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 SRMSQ9H3Y6 488 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 UCK1Q9HA47 277 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 RDH14Q9HBH5 336 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 RXFP3Q9NSD7 469 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 UTP6Q9NYH9 597 aaKnown RBP16.4■□□□□ 0.22
CCM2-205ENST00000472223 RAPGEFL1Q9UHV5 662 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 OTOGLQ3ZCN5 2332 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 USP34Q70CQ2 3546 aa16.4■□□□□ 0.22
CCM2-205ENST00000472223 ARHGEF33A8MVX0 844 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SUPT3HB4E1H0 165 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SH3BP5O60239 455 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SPAG7O75391 227 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SUPT3HO75486 399 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SASH3O75995 380 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 GUCA1CO95843 209 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 CKMT1AP12532 417 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 CD59P13987 128 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 PNLIPP16233 465 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 CKMT2P17540 419 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 AMD1P17707 334 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 GPR3P46089 330 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 HNMTP50135 292 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 LIMK1P53667 647 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 DLG1Q12959 904 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 PRKAA1Q13131 559 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 GPR18Q14330 331 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 CDKL4Q5MAI5 379 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 N4BP2L1Q5TBK1 243 aaPredicted RBP16.39■□□□□ 0.21
CCM2-205ENST00000472223 RAB44Q7Z6P3 723 aaPredicted RBP16.39■□□□□ 0.21
CCM2-205ENST00000472223 C17orf82Q86X59 251 aaPredicted RBP16.39■□□□□ 0.21
CCM2-205ENST00000472223 KIAA2013Q8IYS2 634 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 BANPQ8N9N5 519 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 EXT2Q93063 718 aa16.39■□□□□ 0.21
CCM2-205ENST00000472223 SH3GL2Q99962 352 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms