RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MOCOSQ96EN8 888 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 PKP4Q99569 1192 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 HGH1Q9BTY7 390 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 ACSS2Q9NR19 701 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 CD274Q9NZQ7 290 aa18.69■□□□□ 0.58
PSPC1-203ENST00000471658 ARHGEF17Q96PE2 2063 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-203ENST00000471658 DHRS4L1P0CG22 281 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 MAP4P27816 1152 aaKnown RBP18.68■□□□□ 0.58
PSPC1-203ENST00000471658 NBL1P41271 181 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 GYS2P54840 703 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 PCLAFQ15004 111 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 HHATQ5VTY9 493 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 C10orf107Q8IVU9 208 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 MINDY1Q8N5J2 469 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 MCOLN3Q8TDD5 553 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 SLC37A2Q8TED4 501 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 JPH3Q8WXH2 748 aaPredicted RBP18.68■□□□□ 0.58
PSPC1-203ENST00000471658 ESAMQ96AP7 390 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 PHF21BQ96EK2 531 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 IL17FQ96PD4 163 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 TRIT1Q9H3H1 467 aaKnown RBP18.68■□□□□ 0.58
PSPC1-203ENST00000471658 RDH14Q9HBH5 336 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 COPG2Q9UBF2 871 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 CSNK1G3Q9Y6M4 447 aa18.68■□□□□ 0.58
PSPC1-203ENST00000471658 LNP1A1A4G5 178 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 LRRC14BA6NHZ5 514 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 A8MT66 165 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 NOBOXO60393 691 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 CER1O95813 267 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 MYL2P10916 166 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ALDH3A1P30838 453 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 SERPINB4P48594 390 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 MAZP56270 477 aaKnown RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 KRT33BQ14525 404 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 PFKFB4Q16877 469 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ZXDCQ2QGD7 858 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ZYG11AQ6WRX3 759 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 TBC1D21Q8IYX1 336 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 SFRP1Q8N474 314 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 CXorf40BQ96DE9 158 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 CAMK1GQ96NX5 476 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ARL15Q9NXU5 204 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 SYCE1LA8MT33 242 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 TAPBPO15533 448 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 DFNA5O60443 496 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ENO2P09104 434 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 HIST1H2AGP0C0S8 130 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ZNF806P0C7X5 589 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 MYF5P13349 255 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 HIST1H2ADP20671 130 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 AGTR2P50052 363 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 CCT8P50990 548 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 UBE2IP63279 158 aaKnown RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 OGFOD3Q6PK18 319 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 DCUN1D3Q8IWE4 304 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 SDR16C5Q8N3Y7 309 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 PTGR2Q8N8N7 351 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 FBXO15Q8NCQ5 510 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-203ENST00000471658 FAM76AQ8TAV0 307 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 HIST1H2AHQ96KK5 128 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 HIST1H2AJQ99878 128 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 EGFL8Q99944 293 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 H2AFJQ9BTM1 129 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 TRIM54Q9BYV2 358 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 IRF2BPLQ9H1B7 796 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 RXFP3Q9NSD7 469 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 CPNE7Q9UBL6 633 aa18.67■□□□□ 0.58
PSPC1-203ENST00000471658 ANKRD12Q6UB98 2062 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 SMIM24O75264 130 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 LMNAP02545 664 aaKnown RBP18.66■□□□□ 0.58
PSPC1-203ENST00000471658 BPGMP07738 259 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 GFAPP14136 432 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 XRCC1P18887 633 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-203ENST00000471658 TAC1P20366 129 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 ATP5F1P24539 256 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-203ENST00000471658 MAPK9P45984 424 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 ATXN3P54252 364 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-203ENST00000471658 FBXO39Q8N4B4 442 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 C2orf73Q8N5S3 287 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-203ENST00000471658 OR9A1PQ8NGU1 263 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 RHBDF1Q96CC6 855 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 XKR8Q9H6D3 395 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 MVB12BQ9H7P6 319 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 PARD6AQ9NPB6 346 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 NUDT4Q9NZJ9 180 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 NCKIPSDQ9NZQ3 722 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 ASB1Q9Y576 335 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 HEBP2Q9Y5Z4 205 aa18.66■□□□□ 0.58
PSPC1-203ENST00000471658 KIR2DS5A0A0G2JLQ3 304 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 A0A0G2JNG1 304 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 CCDC189A1A4V9 331 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 OR5K4A6NMS3 321 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 KIR2DS3K7RE56 304 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 MYO1CO00159 1063 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 TRIM38O00635 465 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 POLR3GO15318 223 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-203ENST00000471658 KLK8O60259 260 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 SIX3O95343 332 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-203ENST00000471658 SLC16A8O95907 504 aa18.65■□□□□ 0.58
PSPC1-203ENST00000471658 VIPP01282 170 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms