RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CFAP206Q8IYR0 622 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 GALNT16Q8N428 558 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ZBTB2Q8N680 514 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 OR1L3Q8NH93 324 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PROKR1Q8TCW9 393 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 P3H4Q92791 437 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 SNRNP40Q96DI7 357 aaKnown RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 MOCOSQ96EN8 888 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 RBM41Q96IZ5 413 aaKnown RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 VPS50Q96JG6 964 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 RMDN2Q96LZ7 410 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PPP1R2P1Q96PQ5 205 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ASB8Q9H765 288 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 MVB12BQ9H7P6 319 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 RSPH14Q9UHP6 348 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 ERRFI1Q9UJM3 462 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 PRRC2CQ9Y520 2896 aaKnown RBP8.84□□□□□ -0.99
CPSF4-211ENST00000471455 POLEQ07864 2286 aa8.84□□□□□ -0.99
CPSF4-211ENST00000471455 C17orf113A0A1B0GUU1 675 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 C5orf60A6NFR6 353 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 HACD1B0YJ81 288 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 GPR39O43194 453 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 ZNF749O43361 778 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 ZNF189O75820 626 aaPredicted RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 OR2B3O76000 313 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 SRP72O76094 671 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 CBX6O95503 412 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 CRTAMO95727 393 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 GYPCP04921 128 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 POLBP06746 335 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 RNF224P0DH78 156 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 CD33P20138 364 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 HNRNPH3P31942 346 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 CD68P34810 354 aaPredicted RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 CHRNA4P43681 627 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 MAP2K3P46734 347 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 CD151P48509 253 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 GEMP55040 296 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 WASHC5Q12768 1159 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 RPA4Q13156 261 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 RAPSNQ13702 412 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 TRIM14Q14142 442 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 NOMO1Q15155 1222 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 CYP2A13Q16696 494 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 ZNF789Q5FWF6 425 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 DCAF10Q5QP82 559 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 B4GALNT4Q76KP1 1039 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 PID1Q7Z2X4 250 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 AMIGO1Q86WK6 493 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 TICAM1Q8IUC6 712 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 CISD2Q8N5K1 135 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 SLC35G2Q8TBE7 412 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 DENND1AQ8TEH3 1009 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 NACC2Q96BF6 587 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 TCTN2Q96GX1 697 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 HSH2DQ96JZ2 352 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 FERD3LQ96RJ6 166 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 COPS8Q99627 209 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 C19orf43Q9BQ61 176 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 AP1M1Q9BXS5 423 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 PACSIN1Q9BY11 444 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 TFB2MQ9H5Q4 396 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 TXLNGQ9NUQ3 528 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 ASF1BQ9NVP2 202 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 PTRH2Q9Y3E5 179 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 COPG1Q9Y678 874 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 SPENQ96T58 3664 aaKnown RBP8.83□□□□□ -1
CPSF4-211ENST00000471455 SPTBP11277 2137 aa8.83□□□□□ -1
CPSF4-211ENST00000471455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 CCDC66A2RUB6 948 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 SHISA8B8ZZ34 492 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 BTN3A1O00481 513 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 GAPDHSO14556 408 aaPredicted RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 ZSCAN9O15535 394 aaPredicted RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 OIP5O43482 229 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 PSTPIP1O43586 416 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 LDB2O43679 373 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 BUD23O43709 281 aaKnown RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 KRT86O43790 486 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 CST8O60676 142 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 STK10O94804 968 aaKnown RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 LCA5LO95447 670 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 CLDN1O95832 211 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 CAPN1P07384 714 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 TNNT1P13805 278 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 ATP1B2P14415 290 aaPredicted RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 ST6GAL1P15907 406 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 TNFRSF8P28908 595 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 SHMT2P34897 504 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 CDKN2BP42772 138 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 LMAN1P49257 510 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 DCDP81605 110 aaKnown RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 AIMP2Q13155 320 aaKnown RBP8.82□□□□□ -1
CPSF4-211ENST00000471455 PRPSAP1Q14558 356 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 IQCB1Q15051 598 aa8.82□□□□□ -1
CPSF4-211ENST00000471455 PLEKHN1Q494U1 663 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms