RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NAT14Q8WUY8 206 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 FAM131CQ96AQ9 280 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 ZNF382Q96SR6 550 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 CCT7Q99832 543 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 NUSAP1Q9BXS6 441 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 C1orf21Q9H246 121 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 RASSF4Q9H2L5 321 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
HSPG2-208ENST00000471322 PCDHGA5Q9Y5G8 931 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 FADS3Q9Y5Q0 445 aa17.1■□□□□ 0.33
HSPG2-208ENST00000471322 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
HSPG2-208ENST00000471322 LRRC14BA6NHZ5 514 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 B2RBV5 119 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 VPS4BO75351 444 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 CHEK2O96017 543 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 TSPAN8P19075 237 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 MAPK9P45984 424 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 AGTR2P50052 363 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 ELF3P78545 371 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-208ENST00000471322 CDKL1Q00532 357 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 HSPA14Q0VDF9 509 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 KLF10Q13118 480 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 DNAL1Q4LDG9 190 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 TRIM61Q5EBN2 209 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 WDR45BQ5MNZ6 344 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 PLA2G2CQ5R387 149 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 KANK2Q63ZY3 851 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 ARHGAP24Q8N264 748 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 TCAIMQ8N3R3 496 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 PPP1R36Q96LQ0 422 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 NSUN5Q96P11 429 aaKnown RBP17.09■□□□□ 0.33
HSPG2-208ENST00000471322 EGFL8Q99944 293 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 MYOCQ99972 504 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 SLC12A9Q9BXP2 914 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-208ENST00000471322 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 DOCK9Q9BZ29 2069 aa17.09■□□□□ 0.33
HSPG2-208ENST00000471322 PI4KAP42356 2102 aa17.08■□□□□ 0.33
HSPG2-208ENST00000471322 E2F3O00716 465 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 SGTAO43765 313 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 GDF9O60383 454 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 MMP20O60882 483 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 RNGTTO60942 597 aaKnown RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 GPC4O75487 556 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 JUNP05412 331 aaKnown RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 KRT16P08779 473 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 GSTM1P09488 218 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 THRAP10827 490 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 GPR1P46091 355 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 IRX1P78414 480 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 GSTM4Q03013 218 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 NAA25Q14CX7 972 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ZRSR2Q15696 482 aaKnown RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 RBBP7Q16576 425 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 CYB5D1Q6P9G0 228 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ASB11Q8WXH4 323 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 DNASE2BQ8WZ79 361 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ELMO1Q92556 727 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 C19orf60Q96EN9 201 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ZNF514Q96K75 400 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 CCM2Q9BSQ5 444 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ZMYND15Q9H091 742 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 MMADHCQ9H3L0 296 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 PARVBQ9HBI1 364 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 TAS2R1Q9NYW7 299 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 TNRC6BQ9UPQ9 1833 aaKnown RBP17.08■□□□□ 0.32
HSPG2-208ENST00000471322 SPTBN4Q9H254 2564 aa17.08■□□□□ 0.32
HSPG2-208ENST00000471322 A0A1W2PQU0 124 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 MTX2O75431 263 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 SLCO2B1O94956 709 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ANXA5P08758 320 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ZNF806P0C7X5 589 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 UROSP10746 265 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 PIK3CGP48736 1102 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 PRLHRP49683 370 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CSRP2Q16527 193 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CLEC6AQ6EIG7 209 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 RINLQ6ZS11 566 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 GPRIN3Q6ZVF9 776 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CHSY3Q70JA7 882 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 RASGEF1AQ8N9B8 481 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 RHBDF1Q96CC6 855 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ZNF385DQ9H6B1 395 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ZBTB26Q9HCK0 441 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 TSR3Q9UJK0 312 aaKnown RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 CNOT6Q9ULM6 557 aaKnown RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 ZFR2Q9UPR6 939 aaKnown RBP17.07■□□□□ 0.32
HSPG2-208ENST00000471322 DNAJC15Q9Y5T4 150 aa17.07■□□□□ 0.32
HSPG2-208ENST00000471322 SLC31A1O15431 190 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms