RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 QKIQ96PU8 341 aaKnown RBP eCLIP5.68□□□□□ -1.5
VARS-222ENST00000470953 PLEKHG4BQ96PX9 1271 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 ALS2CR12Q96Q35 445 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 MCCC1Q96RQ3 725 aaPredicted RBP5.68□□□□□ -1.5
VARS-222ENST00000470953 SECISBP2Q96T21 854 aaKnown RBP5.68□□□□□ -1.5
VARS-222ENST00000470953 SPATA16Q9BXB7 569 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 HEMGNQ9BXL5 484 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 RNF32Q9H0A6 362 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 CLEC4MQ9H2X3 399 aaPredicted RBP5.68□□□□□ -1.5
VARS-222ENST00000470953 STN1Q9H668 368 aaKnown RBP5.68□□□□□ -1.5
VARS-222ENST00000470953 NEUROD4Q9HD90 331 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 WASH6PQ9NQA3 447 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 C1GALT1Q9NS00 363 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 RAD18Q9NS91 495 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 CPNE7Q9UBL6 633 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 AMFRQ9UKV5 643 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 KCNK6Q9Y257 313 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 CMYA5Q8N3K9 4069 aa5.68□□□□□ -1.5
VARS-222ENST00000470953 ANKRD12Q6UB98 2062 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 C3orf70A6NLC5 250 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 MIF4GDA9UHW6 222 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 HACD1B0YJ81 288 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 APOC4-APOC2K7ER74 178 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PJA2O43164 708 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 ZNHIT1O43257 154 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 LDB2O43679 373 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 KLF7O75840 302 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 IPO13O94829 963 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 CLDN7O95471 211 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 FTCDO95954 541 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 APOC2P02655 101 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 TPOP07202 933 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PDHA1P08559 390 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PIRTP0C851 137 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 NFKB1P19838 968 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PTPN3P26045 913 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 CTNNA1P35221 906 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 RORAP35398 523 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 STC1P52823 247 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SOX8P57073 446 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 EIF3EP60228 445 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 COPS2P61201 443 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PDE1BQ01064 536 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 DMTNQ08495 405 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 DMPKQ09013 629 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 NIPAL4Q0D2K0 466 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SLC10A2Q12908 348 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 ABRQ12979 859 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GTF2H3Q13889 308 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PRKD1Q15139 912 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 TCEAL1Q15170 157 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GPR19Q15760 415 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PDCD2Q16342 344 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 PLA2G4EQ3MJ16 856 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 Q5PR19 223 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 C10orf62Q5T681 223 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 B3GNTL1Q67FW5 361 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 ALG1LQ6GMV1 187 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 DARS2Q6PI48 645 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 RAD9BQ6WBX8 426 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 CHST15Q7LFX5 561 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GLT6D1Q7Z4J2 308 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GAS2L3Q86XJ1 694 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 CDC20BQ86Y33 519 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 HIPK1Q86Z02 1210 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 TMEM126BQ8IUX1 230 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PHYKPLQ8IUZ5 450 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 DSELQ8IZU8 1212 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 OR1N1Q8NGS0 311 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GDAP1Q8TB36 358 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 CA5BP1Q8WTZ4 195 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PIH1D2Q8WWB5 315 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SPOCK2Q92563 424 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 KRT35Q92764 455 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SH3KBP1Q96B97 665 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 IMP4Q96G21 291 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 MAGEB10Q96LZ2 347 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 PWWP2AQ96N64 755 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 FCRL4Q96PJ5 515 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GBP5Q96PP8 586 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PPP1R2P1Q96PQ5 205 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SRPK1Q96SB4 655 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 VAT1Q99536 393 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 RIOK2Q9BVS4 552 aaKnown RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 OSBPL8Q9BZF1 889 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SLC25A51Q9H1U9 297 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 OSGEPL1Q9H4B0 414 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 ZFYVE1Q9HBF4 777 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GLOD4Q9HC38 313 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 PCMTD2Q9NV79 361 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 P4HTMQ9NXG6 502 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 UBP1Q9NZI7 540 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SAE1Q9UBE0 346 aaPredicted RBP5.67□□□□□ -1.5
VARS-222ENST00000470953 FAM153AQ9UHL3 310 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 EDARQ9UNE0 448 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 SHOC2Q9UQ13 582 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 ZNF711Q9Y462 761 aa5.67□□□□□ -1.5
VARS-222ENST00000470953 GRID2IPA4D2P6 1211 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms