RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PSMF1Q92530 271 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 DLG3Q92796 817 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 NRTNQ99748 197 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 MDFIQ99750 246 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 SYT11Q9BT88 431 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 ZNF160Q9HCG1 818 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
LSM2-209ENST00000470083 FANCLQ9NW38 375 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 SMOXQ9NWM0 555 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 IRAK4Q9NWZ3 460 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.52□□□□□ -0.57
LSM2-209ENST00000470083 PTGFRNQ9P2B2 879 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 FAM8A1Q9UBU6 413 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 MRPS2Q9Y399 296 aaKnown RBP11.52□□□□□ -0.57
LSM2-209ENST00000470083 SPO11Q9Y5K1 396 aa11.52□□□□□ -0.57
LSM2-209ENST00000470083 FOXO6A8MYZ6 492 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 KCNK1O00180 336 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 PRAMEF2O60811 474 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 WISP2O76076 250 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 POLBP06746 335 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 PRR35P0CG20 571 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 MYBL2P10244 700 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 ACPPP15309 386 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 AKT1P31749 480 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 SPAM1P38567 509 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 CACNG1Q06432 222 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 PPP2R5EQ16537 467 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 BCL7AQ4VC05 210 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 FAM151BQ6UXP7 276 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 SHISA6Q6ZSJ9 500 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 NCCRP1Q6ZVX7 275 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 DET1Q7L5Y6 550 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 LILRA3Q8N6C8 439 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 OR52E1Q8NGJ3 308 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 BRIX1Q8TDN6 353 aaKnown RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 NRGNQ92686 78 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 IMP4Q96G21 291 aaKnown RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 RBM41Q96IZ5 413 aaKnown RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 LINC00615Q96LM1 132 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 RNF32Q9H0A6 362 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 SOX17Q9H6I2 414 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 CBX8Q9HC52 389 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 CCM2LQ9NUG4 571 aaPredicted RBP11.51□□□□□ -0.57
LSM2-209ENST00000470083 CTSFQ9UBX1 484 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 NUP210LQ5VU65 1888 aa11.51□□□□□ -0.57
LSM2-209ENST00000470083 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 GLYATL1P3A0A0U1RQE8 302 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 VSTM2BA6NLU5 285 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 MAP2K7O14733 419 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 PRAMEF1O95521 474 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 NDST3O95803 873 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 WDPCPO95876 746 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 F10P00742 488 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 CD48P09326 243 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 UGT2B7P16662 529 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 MSH3P20585 1137 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 ARSFP54793 590 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 IFI35P80217 286 aaPredicted RBP11.5□□□□□ -0.57
LSM2-209ENST00000470083 PMP22Q01453 160 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 SLC25A11Q02978 314 aaKnown RBP11.5□□□□□ -0.57
LSM2-209ENST00000470083 ZBTB17Q13105 803 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 SLC14A2Q15849 920 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 PCSK7Q16549 785 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 KRTCAP3Q53RY4 240 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 FKBP15Q5T1M5 1219 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 TTLL10Q6ZVT0 673 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 BIVMQ86UB2 503 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 NT5DC3Q86UY8 548 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 CFAP206Q8IYR0 622 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 DNAJC22Q8N4W6 341 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 CCNYQ8ND76 341 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 SUN3Q8TAQ9 357 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 FAM71BQ8TC56 605 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 HM13Q8TCT9 377 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 GPR137Q96N19 417 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 MESP1Q9BRJ9 268 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 TRABDQ9H4I3 376 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 MVB12BQ9H7P6 319 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 AKAP6Q13023 2319 aa11.5□□□□□ -0.57
LSM2-209ENST00000470083 E9PLN8 166 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 GAPDHSO14556 408 aaPredicted RBP11.49□□□□□ -0.57
LSM2-209ENST00000470083 ZRANB2O95218 330 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM2-209ENST00000470083 BMP10O95393 424 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 SERPINA7P05543 415 aa11.49□□□□□ -0.57
LSM2-209ENST00000470083 CCDC172P0C7W6 258 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms