RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ATXN7L2Q5T6C5 722 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CACHD1Q5VU97 1274 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 XKR5Q6UX68 686 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 LRRC8DQ7L1W4 858 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ABTB1Q969K4 478 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PLEKHA8Q96JA3 519 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 HHIPQ96QV1 700 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 IL26Q9NPH9 171 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 SERHLQ9NQF3 203 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 IRAK4Q9NWZ3 460 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 TRPM5Q9NZQ8 1165 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 UTS2RQ9UKP6 389 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 A0A096LPI6 279 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CREG1O75629 220 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 TRBC1P01850 177 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 UGT1A1P22309 533 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 UGT1A4P22310 534 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 EEF1B2P24534 225 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PTPN6P29350 595 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 UGT1A3P35503 534 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 UGT1A5P35504 534 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 GDF5P43026 501 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 BMXP51813 675 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PLA2G16P53816 162 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CD47Q08722 323 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 IL18R1Q13478 541 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 GPR162Q16538 588 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 RBM23Q86U06 439 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZC3H7AQ8IWR0 971 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ADHFE1Q8IWW8 467 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 CBARPQ8N350 705 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 DCAF4L2Q8NA75 395 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF555Q8NEP9 628 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 MIPOL1Q8TD10 442 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 TRUB1Q8WWH5 349 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 MUL1Q969V5 352 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF566Q969W8 418 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 TRMT2BQ96GJ1 504 aaKnown RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 HTATIP2Q9BUP3 242 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ASB8Q9H765 288 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 C1orf109Q9NX04 203 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 KLHL42Q9P2K6 505 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 TMEFF2Q9UIK5 374 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF490Q9ULM2 529 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-209ENST00000470026 PDE10AQ9Y233 779 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 ANGPTL3Q9Y5C1 460 aa13.36□□□□□ -0.27
BRCA1-209ENST00000470026 FFAR3O14843 346 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 GPR42O15529 346 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 GREM1O60565 184 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 SEC24AO95486 1093 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 BCKDHAP12694 445 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 ELNP15502 786 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 SELPP16109 830 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 PCSK2P16519 638 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 EPORP19235 508 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 PRPH2P23942 346 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 MAP4P27816 1152 aaKnown RBP13.35□□□□□ -0.27
BRCA1-209ENST00000470026 RYKP34925 604 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 MAGEA2P43356 314 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 CSNK1DP48730 415 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 PIK3CGP48736 1102 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 CLDN8P56748 225 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 C21orf59P57076 290 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 DPY19L1Q2PZI1 675 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 GTDC1Q4AE62 458 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 ZNF691Q5VV52 312 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 DET1Q7L5Y6 550 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 TMEM179BQ7Z7N9 219 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 NPAS4Q8IUM7 802 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 HS3ST5Q8IZT8 346 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 SGCDQ92629 289 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 FAM162AQ96A26 154 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 OR52E6Q96RD3 313 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
BRCA1-209ENST00000470026 SLC6A13Q9NSD5 602 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 AFF4Q9UHB7 1163 aaKnown RBP13.35□□□□□ -0.27
BRCA1-209ENST00000470026 TSR3Q9UJK0 312 aaKnown RBP13.35□□□□□ -0.27
BRCA1-209ENST00000470026 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 INVSQ9Y283 1065 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 PCDHB14Q9Y5E9 798 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 KIAA1671Q9BY89 1806 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 CENPFP49454 3210 aa13.35□□□□□ -0.27
BRCA1-209ENST00000470026 C2orf78A6NCI8 922 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 TBL1XO60907 577 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 SEC22BO75396 215 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 CBSLP0DN79 551 aa13.34□□□□□ -0.27
BRCA1-209ENST00000470026 IRF1P10914 325 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms