RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 OTUD4Q01804 1114 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 TYRO3Q06418 890 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 MESDQ14696 234 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 ZNF658BQ4V348 819 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 IRAK1BP1Q5VVH5 260 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 FCRL6Q6DN72 434 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 H2AFVQ71UI9 128 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 BCORP1Q8N888 145 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 CATSPER1Q8NEC5 780 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 TFB1MQ8WVM0 346 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 ITLN2Q8WWU7 325 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 OR2A14Q96R47 310 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 FCRL5Q96RD9 977 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 NDC1Q9BTX1 674 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 NAT10Q9H0A0 1025 aaKnown RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 EPS8L2Q9H6S3 715 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 IRAK4Q9NWZ3 460 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 KLHL8Q9P2G9 620 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 CRLS1Q9UJA2 301 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 CDC23Q9UJX2 597 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 ICKQ9UPZ9 632 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
TRAPPC12-216ENST00000469400 C2orf81A6NN90 581 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 AGAP14A8MT82 685 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 KRT1P04264 644 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 SNRPB2P08579 225 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 ITGAXP20702 1163 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 ALAS2P22557 587 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 NR2C2P49116 596 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 XIAPP98170 497 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 MPP3Q13368 585 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 BOP1Q14137 746 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 TAF1AQ15573 450 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 ZNF324BQ6AW86 544 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 KIRREL2Q6UWL6 708 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 UNC5AQ6ZN44 842 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 PID1Q7Z2X4 250 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 ZNF567Q8N184 647 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 DNAJC22Q8N4W6 341 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 FLVCR1-AS1Q8TAF5 88 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 CTNNBL1Q8WYA6 563 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 BPIFA3Q9BQP9 254 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 LHPPQ9H008 270 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 FAM96AQ9H5X1 160 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 HS3ST3B1Q9Y662 390 aa12.34□□□□□ -0.43
TRAPPC12-216ENST00000469400 PCM1Q15154 2024 aa12.33□□□□□ -0.43
TRAPPC12-216ENST00000469400 A0A0J9YY10 115 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 SMTNL1A8MU46 457 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 CFAP99D6REC4 459 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 PCDH17O14917 1159 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 AGTP01019 485 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 CHRM5P08912 532 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 PECAM1P16284 738 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 HTR1EP28566 365 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 TDGF1P3P51864 188 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 ZBED6P86452 979 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 RPA4Q13156 261 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 RPUSD3Q6P087 351 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 ISLR2Q6UXK2 745 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 BNC2Q6ZN30 1099 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 LINC00696Q6ZRV3 163 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 BZW1Q7L1Q6 419 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 OVCH1Q7RTY7 1134 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 NXPE1Q8N323 547 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 OR1N1Q8NGS0 311 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 FKBP10Q96AY3 582 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 SPSB2Q99619 263 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 COPS8Q99627 209 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 TRIM56Q9BRZ2 755 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 FSD1LQ9BXM9 530 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 WDR54Q9H977 334 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 CHST11Q9NPF2 352 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
TRAPPC12-216ENST00000469400 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 KLHL18O94889 574 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 ONECUT2O95948 504 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 SERPINC1P01008 464 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 ALBP02768 609 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 COX6B1P14854 86 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 SHMT2P34897 504 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 GCGRP47871 477 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 Q0VFX4 171 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 MFAP5Q13361 173 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 NKG7Q16617 165 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 SLC5A12Q1EHB4 618 aa12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 ZNF630Q2M218 657 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-216ENST00000469400 ODF2Q5BJF6 829 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms