RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CENPLQ8N0S6 344 aaPredicted RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 SPATA6LQ8N4H0 392 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 MCOLN3Q8TDD5 553 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 KCTD4Q8WVF5 259 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 KIAA1191Q96A73 305 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 HIST1H2AHQ96KK5 128 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 CAMK1GQ96NX5 476 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 HIST1H2AJQ99878 128 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 H2AFJQ9BTM1 129 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 RAB11FIP5Q9BXF6 653 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 TRIM54Q9BYV2 358 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 ACBD3Q9H3P7 528 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 CENPHQ9H3R5 247 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 TFB2MQ9H5Q4 396 aaKnown RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 PARVBQ9HBI1 364 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 IGSF5Q9NSI5 407 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 CDV3Q9UKY7 258 aaKnown RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 NOVA2Q9UNW9 492 aaKnown RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 U3KQA8 63 aa14.8□□□□□ -0.04
SNIP1-202ENST00000468040 ZFHX2Q9C0A1 2572 aaPredicted RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
SNIP1-202ENST00000468040 CPED1A4D0V7 1026 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 NPEPPSL1A6NEC2 478 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 LILRA5A6NI73 299 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 GOLGA8RI6L899 631 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 MYO1CO00159 1063 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 CDC7O00311 574 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 SLC30A4O14863 429 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 GP1BAP07359 652 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 GSTA1P08263 222 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 MYF5P13349 255 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 KRT4P19013 534 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 CSRP1P21291 193 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 SDHBP21912 280 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 ACP1P24666 158 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 SHMT2P34897 504 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 PLA2G5P39877 138 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 BDKRB1P46663 353 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 EPHA4P54764 986 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 AP1S2P56377 157 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 DLG1Q12959 904 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 PRKG2Q13237 762 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 ACAP2Q15057 778 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 PLCL1Q15111 1095 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 TSNQ15631 228 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 GUSBP11Q6P575 273 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 SBSNQ6UWP8 590 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 FRA10AC1Q70Z53 315 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 EFL1Q7Z2Z2 1120 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 CLEC14AQ86T13 490 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 SRRM1Q8IYB3 904 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 OR52E1Q8NGJ3 308 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 STAG3L4Q8TBR4 150 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 CCDC74AQ96AQ1 378 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 NXNL1Q96CM4 212 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 EPB41L1Q9H4G0 881 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 DCDC2Q9UHG0 476 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 ADAMTS6Q9UKP5 1117 aa14.79□□□□□ -0.04
SNIP1-202ENST00000468040 TDRKHQ9Y2W6 561 aaKnown RBP14.79□□□□□ -0.04
SNIP1-202ENST00000468040 ASCC3Q8N3C0 2202 aaKnown RBP14.78□□□□□ -0.04
SNIP1-202ENST00000468040 PRAMEF33A0A0G2JMD5 474 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 FAM221BA6H8Z2 402 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 DYNC1I1O14576 645 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 MAP2K7O14733 419 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 GLRA3O75311 464 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 TFEBP19484 476 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 GMPRP36959 345 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 HSD17B2P37059 387 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 CCT5P48643 541 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 ILKQ13418 452 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 KLHL35Q6PF15 583 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 GLRX5Q86SX6 157 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 ISCA2Q86U28 154 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 PLD6Q8N2A8 252 aaKnown RBP14.78□□□□□ -0.04
SNIP1-202ENST00000468040 OR9A1PQ8NGU1 263 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 IFI44Q8TCB0 444 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 LCN9Q8WX39 176 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 ALKBH8Q96BT7 664 aaKnown RBP14.78□□□□□ -0.04
SNIP1-202ENST00000468040 PTERQ96BW5 349 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 SMC6Q96SB8 1091 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 UNKQ9C0B0 810 aaKnown RBP14.78□□□□□ -0.04
SNIP1-202ENST00000468040 RDH14Q9HBH5 336 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 KCNK4Q9NYG8 393 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 SPATA7Q9P0W8 599 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 LNPEPQ9UIQ6 1025 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 IKZF3Q9UKT9 509 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 PDE10AQ9Y233 779 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 OARD1Q9Y530 152 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 FAM186AA6NE01 2351 aa14.78□□□□□ -0.04
SNIP1-202ENST00000468040 ZNF839A8K0R7 811 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 SYCE1LA8MT33 242 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 FOXO6A8MYZ6 492 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 COPEO14579 308 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 OPA1O60313 960 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 KERAO60938 352 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.05
SNIP1-202ENST00000468040 RBP1P09455 135 aa14.77□□□□□ -0.05
SNIP1-202ENST00000468040 GLRBP48167 497 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms