RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 PCDHA13Q9Y5I0 950 aa11.57□□□□□ -0.56
GTF3A-205ENST00000466776 TRBV5-4A0A0C4DH59 114 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 TCP11X1B4DZS4 312 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 LDB2O43679 373 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 CAPN1P07384 714 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 PVRP15151 417 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 NSG1P42857 185 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 RWDD2BP57060 319 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 PRKG2Q13237 762 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 OLIG2Q13516 323 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 ITIH4Q14624 930 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 P3H1Q32P28 736 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 SYTL3Q4VX76 610 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 MLIPQ5VWP3 458 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 RHBDD2Q6NTF9 364 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 TLDC1Q6P9B6 456 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 CDHR3Q6ZTQ4 885 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 MRGPREQ86SM8 312 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 LURAP1LQ8IV03 231 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 TBC1D21Q8IYX1 336 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 ADGRF3Q8IZF5 1079 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 RBMXL3Q8N7X1 1067 aaKnown RBP11.56□□□□□ -0.56
GTF3A-205ENST00000466776 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 PHC3Q8NDX5 983 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 PRR7Q8TB68 274 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 DENND1AQ8TEH3 1009 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 STYXQ8WUJ0 223 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 DNAJC1Q96KC8 554 aaKnown RBP11.56□□□□□ -0.56
GTF3A-205ENST00000466776 TTC1Q99614 292 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 KLHL25Q9H0H3 589 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 C10orf88Q9H8K7 445 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 LRRC40Q9H9A6 602 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 NLE1Q9NVX2 485 aaPredicted RBP11.56□□□□□ -0.56
GTF3A-205ENST00000466776 SMARCAL1Q9NZC9 954 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 OR6C2Q9NZP2 312 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 LUZP4Q9P127 313 aa11.56□□□□□ -0.56
GTF3A-205ENST00000466776 IFT80Q9P2H3 777 aaPredicted RBP11.56□□□□□ -0.56
GTF3A-205ENST00000466776 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
GTF3A-205ENST00000466776 A0A0J9YY10 115 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 CCDC78A2IDD5 438 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 ZSCAN9O15535 394 aaPredicted RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 PSMD3O43242 534 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 GAS8O95995 478 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 OR56A5P0C7T3 313 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 UGT2B7P16662 529 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 PDHA2P29803 388 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 DCDP81605 110 aaKnown RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 TBX2Q13207 712 aaPredicted RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 CYP2A13Q16696 494 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 PARP6Q2NL67 630 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 DCAF10Q5QP82 559 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 ZNF385CQ66K41 422 aaPredicted RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 Q8NA96 180 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 ELMO1Q92556 727 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 DLG3Q92796 817 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 VPS50Q96JG6 964 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 NDC1Q9BTX1 674 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 CHRNA10Q9GZZ6 450 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 ILKAPQ9H0C8 392 aaPredicted RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 XKR8Q9H6D3 395 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 ICKQ9UPZ9 632 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 B3GNT3Q9Y2A9 372 aa11.55□□□□□ -0.56
GTF3A-205ENST00000466776 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 PTRH2Q9Y3E5 179 aaKnown RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 SPENQ96T58 3664 aaKnown RBP11.55□□□□□ -0.56
GTF3A-205ENST00000466776 CCL22O00626 93 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 SEMA7AO75326 666 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 RPN2P04844 631 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 CHRM5P08912 532 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 PIM1P11309 404 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 MSNP26038 577 aaKnown RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 PPARGP37231 505 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 CDKN1CP49918 316 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 MSLNQ13421 630 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 RAPSNQ13702 412 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 SPARCL1Q14515 664 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 DEFB110Q30KQ9 67 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 ZNF658BQ4V348 819 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 PRR30Q53SZ7 412 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-205ENST00000466776 FAM69BQ5VUD6 431 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 IRAK1BP1Q5VVH5 260 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 DENND5AQ6IQ26 1287 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 PACS1Q6VY07 963 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 UNC5AQ6ZN44 842 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 LINC00523Q86TU6 105 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 GALNT16Q8N428 558 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 ZADH2Q8N4Q0 377 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 CLDN19Q8N6F1 224 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 OR5AR1Q8NGP9 310 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 OR5K2Q8NHB8 316 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 NACC2Q96BF6 587 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 PTERQ96BW5 349 aa11.54□□□□□ -0.56
GTF3A-205ENST00000466776 CDKN2AIPNLQ96HQ2 116 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms